Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   SMUGS5_RS04150 Genome accession   NC_018089
Coordinates   866521..868275 (+) Length   584 a.a.
NCBI ID   WP_014834947.1    Uniprot ID   -
Organism   Streptococcus mutans GS-5     
Function   regulate competence (predicted from homology)   
Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type MGE coordinates Gene coordinates Relative position Distance (bp)
Prophage 845334..868275 866521..868275 within 0


Gene organization within MGE regions


Location: 845334..868275
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SMUGS5_RS04070 (SMUGS5_03995) - 845334..846539 (+) 1206 WP_014834939.1 CCA tRNA nucleotidyltransferase -
  SMUGS5_RS04075 (SMUGS5_04000) - 846542..848410 (+) 1869 WP_014834940.1 ABC-F family ATP-binding cassette domain-containing protein -
  SMUGS5_RS04085 (SMUGS5_04010) - 848866..850602 (+) 1737 WP_002283303.1 ABC transporter ATP-binding protein -
  SMUGS5_RS04090 (SMUGS5_04015) - 850613..852385 (+) 1773 WP_014834941.1 ABC transporter ATP-binding protein -
  SMUGS5_RS04095 (SMUGS5_04020) - 852501..853421 (+) 921 WP_014834942.1 AEC family transporter -
  SMUGS5_RS04100 (SMUGS5_04025) gtfD 853641..858029 (+) 4389 WP_014834943.1 glucosyltransferase-S -
  SMUGS5_RS04105 (SMUGS5_04030) - 858205..858714 (-) 510 WP_002274326.1 DUF308 domain-containing protein -
  SMUGS5_RS04110 (SMUGS5_04035) gdhA 859476..860825 (+) 1350 WP_002263849.1 NADP-specific glutamate dehydrogenase -
  SMUGS5_RS04115 (SMUGS5_04040) - 860935..861318 (-) 384 WP_014834944.1 DUF3021 family protein -
  SMUGS5_RS10425 (SMUGS5_04045) queF 861427..861915 (-) 489 WP_002265143.1 preQ(1) synthase -
  SMUGS5_RS10430 (SMUGS5_04050) queE 861928..862644 (-) 717 WP_014834945.1 7-carboxy-7-deazaguanine synthase QueE -
  SMUGS5_RS04130 (SMUGS5_04055) queD 862641..863087 (-) 447 WP_002265145.1 6-carboxytetrahydropterin synthase QueD -
  SMUGS5_RS04135 (SMUGS5_04060) queC 863062..863739 (-) 678 WP_014834946.1 7-cyano-7-deazaguanine synthase QueC -
  SMUGS5_RS04140 (SMUGS5_04065) rcrR 864291..864725 (+) 435 WP_002263292.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  SMUGS5_RS04145 (SMUGS5_04070) rcrP 864729..866531 (+) 1803 WP_002283869.1 ABC transporter ATP-binding protein Regulator
  SMUGS5_RS04150 (SMUGS5_04075) rcrQ 866521..868275 (+) 1755 WP_014834947.1 ABC transporter ATP-binding protein Regulator

Sequence

Protein


Download         Length: 584 a.a.        Molecular weight: 64650.76 Da        Isoelectric Point: 6.0636

>NTDB_id=52029 SMUGS5_RS04150 WP_014834947.1 866521..868275(+) (rcrQ) [Streptococcus mutans GS-5]
MENKKKSLLSQMAPYLKGYKALFGLAVIFTIVSSTITVIGPDRLKEMTDTMTKGLAGKIDLDKIGEIALTLALLYFAGAL
VSYTASFIVSTLIQKFSQRLRNAIADKINKVPLKYFDSHSQGDTLSRVTNDVDLMTQSFNQSLVSMVAAIILLIGSIFMM
IKTNGALAATAILSVFAGFVLSTVIMAKSQPLFKKQQANLADVSGYVEEVYSGHNVVSSYNAIQQSKKQFENLNDQLFAS
MWKSQFFSGIMMPLMQFIGNFGYVMVCIVGATMAINGDITMGTIVAFMTYVRIFTQPIAQIAQGITQLQSANAAMGRVFE
FLDEEEIEDENHKVKQLEKVEGNVNFDNVFFGYSPDKTIIHDFSAHAKAGQKIAIVGPTGAGKTTIVNLLMRFYEVDRGM
IFIDGVNIHDMTRKEVHDAFAMVLQDTWLFEGTVKENLIYNQKHITDEQVIAAAKAVGVHHFIKTLPKGYDTVLDDSVTL
SVGQKQLLTIARALLKDAPLLILDEATSSVDTRTEELIQRAMDHLMEGRTSFVIAHRLSTIRNADLILVMRDGNIIEQGS
HDQLMAENGFYADLYNSQFTEEVA

Nucleotide


Download         Length: 1755 bp        

>NTDB_id=52029 SMUGS5_RS04150 WP_014834947.1 866521..868275(+) (rcrQ) [Streptococcus mutans GS-5]
ATGGAAAATAAGAAGAAATCATTATTAAGCCAAATGGCTCCTTACCTTAAAGGCTATAAGGCTTTATTTGGACTTGCTGT
CATTTTTACTATCGTTTCAAGTACGATTACTGTTATTGGACCTGACCGGCTGAAAGAGATGACAGATACCATGACCAAAG
GGCTGGCAGGAAAAATTGATTTAGATAAAATCGGTGAGATTGCTCTAACCTTGGCTCTCTTATACTTTGCTGGTGCTTTG
GTTTCTTATACTGCTAGCTTTATTGTGTCCACTTTGATTCAAAAGTTTTCGCAACGTCTGCGCAATGCCATTGCAGATAA
AATCAATAAGGTACCGCTCAAATATTTTGACAGCCATTCACAAGGAGATACCTTGTCTCGAGTGACCAATGATGTGGATT
TAATGACACAGTCTTTCAACCAAAGTTTAGTTTCAATGGTAGCAGCTATAATTCTCCTGATTGGCTCTATTTTCATGATG
ATTAAAACCAATGGAGCTCTTGCAGCGACCGCTATTTTGTCTGTTTTTGCTGGTTTTGTGTTATCCACTGTTATCATGGC
CAAGAGCCAGCCGCTTTTTAAAAAGCAACAAGCTAATCTAGCCGATGTCAGCGGTTATGTTGAAGAGGTCTATTCAGGTC
ATAATGTGGTTTCTAGTTACAATGCGATTCAGCAAAGCAAGAAGCAGTTTGAAAACTTGAATGACCAATTATTTGCAAGT
ATGTGGAAATCACAATTCTTTTCTGGAATTATGATGCCCCTTATGCAATTCATCGGAAATTTTGGGTATGTCATGGTCTG
TATTGTCGGTGCTACCATGGCTATTAACGGCGATATTACTATGGGAACGATTGTTGCCTTTATGACTTACGTCCGTATTT
TTACTCAGCCCATTGCGCAGATTGCTCAAGGAATCACTCAATTGCAATCAGCTAATGCTGCTATGGGACGTGTCTTTGAA
TTTCTTGATGAGGAAGAAATAGAAGACGAAAACCATAAAGTTAAACAACTTGAAAAAGTTGAAGGAAATGTTAATTTTGA
CAATGTTTTCTTTGGTTATAGTCCTGATAAAACTATTATTCATGATTTCTCGGCTCATGCTAAGGCTGGTCAAAAAATTG
CTATTGTGGGACCGACTGGTGCGGGTAAGACAACGATTGTTAACTTACTTATGCGTTTCTATGAGGTTGATAGAGGGATG
ATTTTTATTGATGGAGTTAATATCCATGATATGACACGAAAAGAAGTGCATGATGCTTTTGCCATGGTACTCCAAGATAC
TTGGCTCTTTGAAGGTACAGTTAAGGAAAATCTGATTTATAATCAAAAACATATCACTGATGAGCAAGTGATTGCAGCAG
CTAAGGCAGTTGGTGTTCATCATTTCATCAAGACTTTACCTAAGGGTTATGATACTGTTTTAGATGATTCGGTCACCTTA
TCAGTCGGTCAAAAACAACTCTTGACCATTGCACGTGCTCTTCTTAAAGATGCACCGCTTCTGATTCTTGATGAAGCAAC
TTCCTCTGTTGATACTCGTACGGAAGAACTTATTCAAAGGGCTATGGATCATTTGATGGAGGGGCGGACATCATTCGTTA
TTGCCCATCGTCTGTCAACTATTCGCAATGCTGATCTTATTCTTGTCATGAGAGATGGTAATATTATTGAACAAGGCAGC
CATGACCAATTGATGGCAGAAAATGGCTTCTATGCCGATCTCTATAATAGTCAATTTACAGAAGAAGTGGCTTGA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(24-297)

ABC transporter (ABC_tran)

(361-508)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

99.829

100

0.998

Multiple sequence alignment