Detailed information NTG0052019

Bioinformatically predicted

Overview

• Name: xerS
• Type: Machinery gene
• Locus tag: YB51_RS05030
• Genome accession: NC_022516
• Coordinates: 1022023..1023093 (+)
• Length: 356 a.a.
• NCBI ID: WP_002935006.1
• Uniprot ID: -
• Organism: Streptococcus suis YB51
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1017023..1028093

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
YB51_RS05005 (YB51_4925)	-	1017744..1018076 (+)	333	WP_002935001.1	putative DNA-binding protein	-
YB51_RS05010 (YB51_4930)	ffh	1018089..1019663 (+)	1575	WP_002935002.1	signal recognition particle protein	-
YB51_RS05015 (YB51_4935)	-	1019857..1020525 (+)	669	WP_002935003.1	SatD family protein	-
YB51_RS05020 (YB51_4940)	-	1020529..1021269 (+)	741	WP_009909823.1	DUF3307 domain-containing protein	-
YB51_RS05025 (YB51_4945)	-	1021335..1021856 (+)	522	WP_002935005.1	AAA family ATPase	-
YB51_RS05030 (YB51_4950)	xerS	1022023..1023093 (+)	1071	WP_002935006.1	tyrosine recombinase XerS	Machinery gene
YB51_RS05035 (YB51_4955)	-	1023163..1024671 (-)	1509	WP_013730362.1	phosphoglucomutase	-
YB51_RS05040 (YB51_4960)	-	1024747..1025688 (-)	942	WP_002935009.1	sensor histidine kinase	-
YB51_RS05045 (YB51_4965)	braR	1025685..1026350 (-)	666	WP_009909826.1	DNA-binding response regulator	Regulator
YB51_RS05050 (YB51_4970)	-	1026389..1026646 (-)	258	WP_002935012.1	type II toxin-antitoxin system RelE family toxin	-
YB51_RS05055 (YB51_4975)	relB	1026636..1026875 (-)	240	WP_002935014.1	type II toxin-antitoxin system RelB family antitoxin	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 41545.71 Da
• Isoelectric Point: 9.2257

>NTDB_id=52019 YB51_RS05030 WP_002935006.1 1022023..1023093(+) (xerS) [Streptococcus suis YB51]
MRRELLLEKIDQLKEIMPWFVLEYYQSKLAVPYSFTTLYEYLKEYRRFFEWLQDSDLVSVERIADIPLDILEHLTKKDME
AFILYLRERPLLNANTTQNGVSQTTINRTLSALSSLFKYLTEEVENEQGEPYFYRNVMKKVSTKKKKETLAARAENIKQK
LFLGDETMEFLDYVDKEYQVNLSKRALSSFQKNKERDLAILALLLASGVRLSEAVNLDLRDVNLNMMIIEVTRKGGKRDS
VNVAGFAKPYLEAYMSIRQQRYKAEKTDTAFFLSEYRGLPNRIDASSIEKMVAKYSADFKIRVTPHKLRHTLATRLYDAT
KSQVLVSHQLGHANTQVTDLYTHIVNDEQKNALDQL

Nucleotide

• Length: 1071 bp

>NTDB_id=52019 YB51_RS05030 WP_002935006.1 1022023..1023093(+) (xerS) [Streptococcus suis YB51]
ATGAGACGCGAGTTATTACTAGAAAAAATTGATCAACTAAAAGAAATTATGCCTTGGTTTGTTCTGGAATATTATCAGTC
AAAATTGGCTGTGCCTTACAGTTTTACTACCTTATATGAATACTTGAAAGAATACCGTCGATTCTTTGAGTGGTTACAGG
ATTCGGATTTGGTATCTGTGGAACGGATTGCTGACATTCCTTTGGATATTCTGGAACATTTGACAAAAAAAGATATGGAA
GCCTTTATTCTTTATCTGCGGGAGCGTCCCTTGCTGAACGCCAATACCACGCAGAATGGTGTGTCGCAGACCACCATTAA
CCGTACCCTGTCGGCTCTTTCTAGTCTCTTCAAGTATTTAACCGAAGAAGTGGAAAATGAGCAGGGCGAGCCCTACTTCT
ACCGCAATGTCATGAAAAAGGTATCTACCAAGAAGAAGAAGGAAACCTTGGCAGCGCGGGCTGAGAACATCAAGCAAAAG
CTCTTTTTGGGCGATGAAACCATGGAGTTCTTGGACTATGTGGACAAGGAATACCAAGTCAATCTCTCTAAACGTGCCCT
CTCCTCTTTCCAGAAAAATAAGGAGCGAGATTTGGCGATTCTGGCACTTCTCTTGGCTTCTGGCGTCCGTCTGTCAGAAG
CGGTGAATTTGGATCTTCGAGATGTAAATCTCAATATGATGATTATCGAAGTAACCCGTAAGGGTGGTAAGCGGGACTCG
GTCAATGTGGCTGGGTTTGCTAAGCCCTATCTGGAAGCCTATATGAGCATCCGTCAGCAACGCTACAAGGCTGAAAAAAC
GGATACGGCCTTCTTCCTGTCCGAATACCGTGGTCTACCCAATCGTATCGATGCTTCTTCTATTGAAAAAATGGTTGCCA
AGTACTCTGCGGACTTCAAGATACGCGTAACCCCCCACAAACTCCGTCATACCTTGGCAACTCGCCTATACGACGCCACA
AAGTCGCAAGTTCTGGTCAGTCATCAGCTGGGCCACGCCAATACTCAGGTCACTGACCTCTACACCCATATAGTCAATGA
TGAGCAAAAAAATGCACTGGATCAATTATAG

Domains

Predicted by InterProScan.

• Phage integrase, N-terminal SAM-like domain (Phage_int_SAM_4) (33-122)

• Phage integrase family (Phage_integrase) (190-344)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xerS	Streptococcus pneumoniae R6	82.865	100	0.829