Detailed information    

insolico Bioinformatically predicted

Overview

Name   sepM   Type   Regulator
Locus tag   SMUGS5_RS02370 Genome accession   NC_018089
Coordinates   477420..478460 (+) Length   346 a.a.
NCBI ID   WP_002264420.1    Uniprot ID   -
Organism   Streptococcus mutans GS-5     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context

Location: 472420..483460
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SMUGS5_RS02340 (SMUGS5_02245) - 472682..472885 (+) 204 WP_002263011.1 hypothetical protein -
  SMUGS5_RS02345 (SMUGS5_02250) - 472926..473171 (+) 246 WP_002267028.1 hypothetical protein -
  SMUGS5_RS02350 (SMUGS5_02255) - 473367..473933 (+) 567 WP_002264416.1 TetR/AcrR family transcriptional regulator -
  SMUGS5_RS02355 (SMUGS5_02260) - 474054..475829 (+) 1776 WP_014834872.1 oleate hydratase -
  SMUGS5_RS02360 (SMUGS5_02265) rsmD 476413..476952 (+) 540 WP_002267337.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  SMUGS5_RS02365 (SMUGS5_02270) coaD 476942..477442 (+) 501 WP_002264419.1 pantetheine-phosphate adenylyltransferase -
  SMUGS5_RS02370 (SMUGS5_02275) sepM 477420..478460 (+) 1041 WP_002264420.1 S16 family serine protease SepM Regulator
  SMUGS5_RS02375 (SMUGS5_02280) - 478533..479864 (+) 1332 WP_002262040.1 bifunctional metallophosphatase/5'-nucleotidase -
  SMUGS5_RS02380 (SMUGS5_02285) - 479861..480409 (+) 549 WP_002266328.1 YutD family protein -
  SMUGS5_RS02385 (SMUGS5_02290) rlmN 480406..481491 (+) 1086 WP_002264424.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  SMUGS5_RS02390 (SMUGS5_02295) - 481491..482027 (+) 537 WP_014834873.1 VanZ family protein -

Sequence

Protein


Download         Length: 346 a.a.        Molecular weight: 37952.90 Da        Isoelectric Point: 10.1655

>NTDB_id=52020 SMUGS5_RS02370 WP_002264420.1 477420..478460(+) (sepM) [Streptococcus mutans GS-5]
MKTNKKFKWWLISGISLILLLMVFFFPLPYYLEMPGGAYDIRSVVTVNHKEDKEKGSYNFVAVSLSKATPIQVLYAWLTP
FTEITSAKETTGGVSDADYMRINQFYMETSQNGAIYKALSLAHKKASFNYMGVYVLQVSKNSTFKGVLNIADTVTGVNDK
TFHSSKELIKYVSGLKLGSKVSVQYTSENKKKTAKGKVIKLSNGKNGIGIGLVDHTKVTSDDKIEFSTNGIGGPSAGLMF
TLDIYDQLVKEDLRKGRIIAGTGTIGEDGSVGDIGGADMKVAAADRINADIFFVPNNPVSKATLKKNPKALTNYQEAKQA
AKKLGTKMKIVPVKNVQEAIDYLRKH

Nucleotide


Download         Length: 1041 bp        

>NTDB_id=52020 SMUGS5_RS02370 WP_002264420.1 477420..478460(+) (sepM) [Streptococcus mutans GS-5]
GTGAAAACAAACAAAAAATTTAAATGGTGGCTAATCAGCGGTATCAGTCTTATTTTGCTTTTAATGGTATTCTTTTTTCC
TCTTCCTTACTATTTAGAAATGCCCGGCGGAGCCTATGATATTCGTTCTGTTGTGACGGTTAATCATAAAGAAGATAAAG
AGAAGGGATCTTATAATTTTGTAGCTGTCTCTCTTAGTAAGGCAACCCCCATACAAGTCCTCTATGCTTGGTTGACCCCT
TTTACAGAAATTACCAGTGCCAAGGAAACAACTGGTGGTGTTAGTGATGCGGATTATATGAGGATTAATCAGTTTTATAT
GGAAACCTCACAAAATGGAGCTATCTATAAAGCTCTTTCTTTAGCTCATAAAAAGGCAAGCTTTAATTATATGGGTGTTT
ATGTTTTGCAGGTTAGTAAGAATTCAACATTCAAGGGTGTTTTAAATATTGCTGATACTGTAACAGGCGTTAATGACAAG
ACCTTTCATAGTTCAAAAGAATTGATTAAATATGTGTCTGGACTGAAATTAGGCAGCAAGGTCAGTGTTCAATATACTTC
TGAAAATAAGAAGAAAACAGCCAAGGGCAAAGTTATTAAATTGTCAAATGGCAAAAATGGTATTGGCATTGGCTTGGTTG
ATCATACCAAGGTCACTTCTGATGATAAAATCGAATTTAGCACAAATGGTATTGGAGGGCCAAGTGCCGGTCTCATGTTT
ACCCTTGATATTTACGATCAACTAGTGAAAGAGGACTTACGTAAGGGTCGTATTATTGCAGGTACTGGTACTATTGGAGA
AGACGGGTCTGTTGGGGATATTGGCGGTGCTGATATGAAAGTAGCAGCAGCAGATAGGATTAATGCAGATATCTTTTTTG
TTCCCAATAATCCTGTAAGTAAGGCAACTTTGAAAAAAAATCCCAAAGCTCTCACTAATTATCAAGAAGCTAAGCAGGCT
GCTAAAAAATTAGGCACTAAGATGAAGATTGTCCCTGTTAAAAATGTGCAGGAGGCTATTGATTACCTAAGAAAACACTA
A

Domains

Predicted by InterproScan.

PDZ domain (PDZ_2)

(131-195)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

99.711

100

0.997

Multiple sequence alignment