Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   K0V03_RS20130 Genome accession   NZ_CP080508
Coordinates   3778114..3779382 (+) Length   422 a.a.
NCBI ID   WP_085186057.1    Uniprot ID   -
Organism   Bacillus subtilis strain HD15     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 3773114..3784382
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K0V03_RS20105 (K0V03_20105) pyrH 3773887..3774609 (+) 723 WP_003220923.1 UMP kinase -
  K0V03_RS20110 (K0V03_20110) frr 3774611..3775168 (+) 558 WP_003231927.1 ribosome recycling factor -
  K0V03_RS20115 (K0V03_20115) uppS 3775299..3776081 (+) 783 WP_003231925.1 isoprenyl transferase -
  K0V03_RS20120 (K0V03_20120) cdsA 3776085..3776894 (+) 810 WP_003231924.1 phosphatidate cytidylyltransferase -
  K0V03_RS20125 (K0V03_20125) dxr 3776956..3778107 (+) 1152 WP_003245155.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  K0V03_RS20130 (K0V03_20130) eeP 3778114..3779382 (+) 1269 WP_085186057.1 RIP metalloprotease RseP Regulator
  K0V03_RS20135 (K0V03_20135) proS 3779415..3781109 (+) 1695 WP_003231918.1 proline--tRNA ligase -

Sequence

Protein


Download         Length: 422 a.a.        Molecular weight: 46724.44 Da        Isoelectric Point: 4.9826

>NTDB_id=520094 K0V03_RS20130 WP_085186057.1 3778114..3779382(+) (eeP) [Bacillus subtilis strain HD15]
MFVNTVIAFIIIFGTLVFFHELGHLLLAQRAGILCREFAIGFGPKIFSFKKNETVYTIRLLPVGGFVRMAGEDPEMIEVK
PGYTVGLLFNKEDQVEKVIINQKEKYPDALVIEVETADLEHDMKITGYEQGKEDELSSFTVSETSFFIVDGEEVQIAPYN
RQFGSKPVWQRIKAIAAGPIMNFILAYVILVMLGLIQGVPSNEPMLGQLTDNGRAAEAGLKEGDYIQSINGEKMRSWTDI
VSAVKENPEKEMDVAVKRDNKTLHISVTPEAVKDENKKTIGRFGSYAPTEKGVLSAVAYGATSTVDIGNQILETFGNLVT
GQFKINMLAGPVGIYDMTDQVAKTGLVNLVRFAAFLSINLGIVNLLPIPALDGGRLLFLFIEAIRGKPINREKEAFVVFI
GVAFLMLLMLVVTWNDIQRLFL

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=520094 K0V03_RS20130 WP_085186057.1 3778114..3779382(+) (eeP) [Bacillus subtilis strain HD15]
ATGTTCGTGAATACAGTTATAGCGTTTATCATTATTTTCGGAACGCTCGTTTTCTTCCATGAACTGGGCCATTTATTGCT
AGCCCAAAGAGCGGGAATTCTCTGCCGTGAATTTGCGATCGGCTTCGGTCCAAAGATTTTTTCTTTCAAAAAAAATGAAA
CAGTTTATACGATCAGGCTGCTTCCGGTCGGCGGATTTGTTCGTATGGCCGGCGAAGATCCGGAAATGATTGAGGTGAAA
CCCGGATACACGGTCGGGCTTCTGTTTAATAAGGAAGATCAAGTTGAGAAAGTCATCATCAATCAAAAGGAAAAATATCC
GGATGCTTTAGTCATTGAAGTGGAAACAGCGGATTTAGAGCATGACATGAAGATCACCGGTTATGAACAGGGGAAAGAGG
ACGAACTTTCCAGCTTTACTGTCAGCGAAACATCCTTTTTTATTGTAGACGGAGAAGAAGTGCAGATTGCGCCGTATAAT
CGCCAATTTGGTTCCAAACCTGTGTGGCAGCGGATTAAAGCAATTGCTGCAGGGCCGATTATGAACTTTATTTTAGCTTA
CGTCATTTTAGTGATGCTTGGGCTGATTCAAGGCGTACCGTCAAATGAACCTATGCTCGGGCAGCTGACAGACAATGGAC
GGGCAGCTGAAGCAGGGCTAAAAGAAGGGGATTATATCCAAAGCATTAACGGAGAGAAAATGAGGTCTTGGACTGACATT
GTCTCCGCTGTAAAAGAAAACCCGGAGAAAGAAATGGACGTTGCAGTAAAAAGAGATAACAAAACGCTTCATATTTCGGT
GACTCCGGAAGCTGTTAAAGATGAGAACAAAAAAACAATCGGCCGTTTCGGTTCCTATGCGCCGACTGAAAAAGGCGTAC
TCTCAGCGGTTGCTTACGGCGCGACATCAACAGTTGACATTGGCAATCAAATCTTAGAAACGTTTGGTAATTTAGTAACA
GGACAATTTAAAATAAATATGTTGGCGGGACCAGTTGGTATTTATGATATGACAGACCAAGTGGCGAAAACCGGGTTAGT
TAATTTGGTTCGTTTCGCTGCGTTTTTAAGCATTAATCTTGGGATTGTCAACCTGCTTCCGATTCCGGCACTTGACGGAG
GAAGACTGTTGTTTCTATTTATTGAAGCGATTCGGGGCAAACCGATTAACAGGGAAAAAGAAGCATTTGTTGTGTTTATC
GGAGTAGCTTTCTTAATGCTTCTTATGCTGGTTGTCACATGGAACGATATCCAGCGGCTGTTTTTGTAA

Domains

Predicted by InterProScan.

Peptidase family M50 (Peptidase_M50)

(8-408)

PDZ domain (PDZ_6)

(212-258)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

39.171

100

0.403
  eeP Streptococcus thermophilus LMG 18311

39.302

100

0.4