Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | JEQ25_RS13180 | Genome accession | NZ_CP066380 |
| Coordinates | 2508689..2509726 (-) | Length | 345 a.a. |
| NCBI ID | WP_029317912.1 | Uniprot ID | A0A162U359 |
| Organism | Bacillus subtilis strain ID-A05 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2503689..2514726
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JEQ25_RS13130 (JEQ25_13050) | tasA | 2503786..2504571 (-) | 786 | WP_014664586.1 | biofilm matrix protein TasA | - |
| JEQ25_RS13135 (JEQ25_13055) | sipW | 2504635..2505207 (-) | 573 | WP_003230181.1 | signal peptidase I | - |
| JEQ25_RS13140 (JEQ25_13060) | tapA | 2505191..2505952 (-) | 762 | WP_003230180.1 | amyloid fiber anchoring/assembly protein TapA | - |
| JEQ25_RS13145 (JEQ25_13065) | yqzG | 2506224..2506550 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| JEQ25_RS13150 (JEQ25_13070) | spoIIT | 2506592..2506771 (-) | 180 | WP_029726723.1 | YqzE family protein | - |
| JEQ25_RS13155 (JEQ25_13075) | comGG | 2506843..2507217 (-) | 375 | WP_014480253.1 | ComG operon protein ComGG | Machinery gene |
| JEQ25_RS13160 (JEQ25_13080) | comGF | 2507218..2507601 (-) | 384 | WP_046160582.1 | ComG operon protein ComGF | Machinery gene |
| JEQ25_RS13165 (JEQ25_13085) | comGE | 2507627..2507974 (-) | 348 | WP_046381178.1 | ComG operon protein 5 | Machinery gene |
| JEQ25_RS13170 (JEQ25_13090) | comGD | 2507958..2508389 (-) | 432 | WP_046381179.1 | comG operon protein ComGD | Machinery gene |
| JEQ25_RS13175 (JEQ25_13095) | comGC | 2508379..2508675 (-) | 297 | WP_014477332.1 | comG operon protein ComGC | Machinery gene |
| JEQ25_RS13180 (JEQ25_13100) | comGB | 2508689..2509726 (-) | 1038 | WP_029317912.1 | comG operon protein ComGB | Machinery gene |
| JEQ25_RS13185 (JEQ25_13105) | comGA | 2509713..2510783 (-) | 1071 | WP_004399124.1 | competence protein ComGA | Machinery gene |
| JEQ25_RS13190 (JEQ25_13110) | - | 2510995..2511192 (-) | 198 | WP_014480259.1 | CBS domain-containing protein | - |
| JEQ25_RS13195 (JEQ25_13115) | corA | 2511194..2512147 (-) | 954 | WP_004399136.1 | magnesium transporter CorA | - |
| JEQ25_RS13200 (JEQ25_13120) | yqhB | 2512290..2513618 (+) | 1329 | WP_003230150.1 | hemolysin family protein | - |
| JEQ25_RS13205 (JEQ25_13125) | rsbRD | 2513671..2514507 (-) | 837 | WP_046381180.1 | RsbT co-antagonist protein RsbRD | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39662.10 Da Isoelectric Point: 9.7153
>NTDB_id=519832 JEQ25_RS13180 WP_029317912.1 2508689..2509726(-) (comGB) [Bacillus subtilis strain ID-A05]
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTGSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTGSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=519832 JEQ25_RS13180 WP_029317912.1 2508689..2509726(-) (comGB) [Bacillus subtilis strain ID-A05]
ATGAAAAAGATTAGAAAAGTCTGGTCGTTAAAGGATCAAGCCAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGGTTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTAAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGCCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAAAAGATTAGAAAAGTCTGGTCGTTAAAGGATCAAGCCAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGGTTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTAAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGCCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
99.381 |
93.623 |
0.93 |