Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   JEQ25_RS06645 Genome accession   NZ_CP066380
Coordinates   1248194..1249345 (+) Length   383 a.a.
NCBI ID   WP_046380934.1    Uniprot ID   A0AA96USA1
Organism   Bacillus subtilis strain ID-A05     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context

Location: 1243194..1254345
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JEQ25_RS06610 (JEQ25_06555) yjbB 1243865..1245082 (+) 1218 WP_080478438.1 MFS transporter -
  JEQ25_RS06615 (JEQ25_06560) yjbC 1245247..1245825 (+) 579 WP_003224597.1 GNAT family N-acetyltransferase -
  JEQ25_RS06620 (JEQ25_06565) spx 1246006..1246401 (+) 396 WP_014476435.1 transcriptional regulator Spx -
  JEQ25_RS06625 (JEQ25_06570) yjbE 1246444..1247100 (-) 657 WP_003232944.1 TerC family protein -
  JEQ25_RS06630 (JEQ25_06575) - 1247270..1247410 (+) 141 WP_119122854.1 hypothetical protein -
  JEQ25_RS06635 (JEQ25_06580) mecA 1247377..1248033 (+) 657 WP_003245194.1 adaptor protein MecA Regulator
  JEQ25_RS06640 (JEQ25_06585) - 1248028..1248150 (-) 123 WP_003245684.1 hypothetical protein -
  JEQ25_RS06645 (JEQ25_06590) coiA 1248194..1249345 (+) 1152 WP_046380934.1 competence protein CoiA Machinery gene
  JEQ25_RS06650 (JEQ25_06595) pepF 1249575..1251404 (+) 1830 WP_173401378.1 oligoendopeptidase F -
  JEQ25_RS06655 (JEQ25_06600) - 1251442..1251609 (-) 168 WP_003244944.1 hypothetical protein -
  JEQ25_RS06660 (JEQ25_06605) spxH 1251923..1252822 (-) 900 WP_024573348.1 protease adaptor protein SpxH -
  JEQ25_RS06665 (JEQ25_06610) yjbI 1252819..1253217 (-) 399 WP_046380935.1 thiol management oxidoreductase -
  JEQ25_RS06670 (JEQ25_06615) cwlQ 1253472..1254206 (-) 735 WP_046380936.1 bifunctional muramidase/murein lytic transglycosylase -

Sequence

Protein


Download         Length: 383 a.a.        Molecular weight: 44783.89 Da        Isoelectric Point: 10.0034

>NTDB_id=519812 JEQ25_RS06645 WP_046380934.1 1248194..1249345(+) (coiA) [Bacillus subtilis strain ID-A05]
MFSAVTEDGQLFHLLGAQQNQKLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCSIDIEPESAYHLEGKRQLYVWLK
TQRASPILEPYIRTINQRPDVMARIKEHMLAVEYQCATIAPDVFQKRTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSAF
HWQFINASPYRELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGAGDLFFTEPKPSIQYSGWTKAIHRFRHKPH
RFNSKETNRLRLLFYEKRQTPFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGGKRAPIRFSAVLQQCKLHIHNK
NIALRFECSEECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAGGIHSMQDLIERDRSCFIE

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=519812 JEQ25_RS06645 WP_046380934.1 1248194..1249345(+) (coiA) [Bacillus subtilis strain ID-A05]
TTGTTTAGTGCTGTGACTGAAGACGGCCAACTGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCGGAGACG
GTTCTTCTGTCCGGTATGCGGGGGAGAGCTAGCTGTGAAGCTCGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGA
ACAAGTCCTGCTCCATAGACATCGAACCGGAAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAA
ACACAACGGGCTTCACCAATATTGGAGCCGTATATAAGGACAATCAACCAAAGACCGGACGTCATGGCAAGGATCAAGGA
GCATATGCTTGCTGTTGAATATCAATGCGCCACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAG
AAGGAATCATCCCGCAGTGGATTATGGGATACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAGCTTTT
CATTGGCAGTTTATCAATGCAAGTCCATACAGAGAGCTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGGCTCAG
CCACATCATTCCATTCTACACAAACCATTCTTATTCCTCAGTCCAAACGATCCCTATCCATCGGGCAGGTGCAGGCGATC
TTTTTTTCACTGAACCGAAACCCTCAATTCAATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCAT
CGGTTTAACTCAAAGGAAACAAATCGCCTTAGGCTGCTGTTTTATGAGAAACGGCAGACGCCTTTTTCTTTTCTGCCGAC
TGAAGTGTTTGTTCCTGTTAGAAAAGGGGCAGTTTTTAAGAGTCCGGTTTTTGTGTGGCAGGGGTTTCTTTATTTGTTTA
TGACGGATCTTGGAGGTAAACGTGCGCCAATTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAATAAG
AACATTGCACTCAGGTTTGAATGCAGCGAAGAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAA
GGGATTTTTAAGGGAGACTCAGAAAGAAGTATATGTGCTGAATCAGCCTGCAGGCGGCATACACTCCATGCAGGATCTCA
TAGAAAGAGACCGCAGCTGTTTTATAGAATGA

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(1-373)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

98.928

97.389

0.963