Detailed information NTG0519700

Bioinformatically predicted

Overview

• Name: luxO
• Type: Regulator
• Locus tag: K1T74_RS00885
• Genome accession: NZ_CP080462
• Coordinates: 182426..183826 (-)
• Length: 466 a.a.
• NCBI ID: WP_000086389.1
• Uniprot ID: -
• Organism: Vibrio cholerae strain ICDC-VC702
• Function: promote HapR production (predicted from homology) Competence regulation

Genomic Context

Location: 177426..188826

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K1T74_RS00875	add	178740..179744 (-)	1005	WP_114735231.1	adenosine deaminase	-
K1T74_RS00880	-	179836..182367 (-)	2532	WP_053034362.1	EAL domain-containing protein	-
K1T74_RS00885	luxO	182426..183826 (-)	1401	WP_000086389.1	nitrogen regulation protein NR(I)	Regulator
K1T74_RS00890	glnL	183836..184894 (-)	1059	WP_220106236.1	nitrogen regulation protein NR(II)	-
K1T74_RS00895	-	185033..185623 (-)	591	WP_032477685.1	DUF4124 domain-containing protein	-
K1T74_RS00900	glnA	185801..187210 (-)	1410	WP_000110151.1	glutamate--ammonia ligase	-
K1T74_RS00905	-	187355..187678 (+)	324	WP_108336202.1	hypothetical protein	-

Sequence

Protein

• Length: 466 a.a.
• Molecular weight: 52319.80 Da
• Isoelectric Point: 6.6387

>NTDB_id=519700 K1T74_RS00885 WP_000086389.1 182426..183826(-) (luxO) [Vibrio cholerae strain ICDC-VC702]
MSRGYVWVVDDDSSIRWVMEKTLSSAHIKCETFADAESVLLALERETPDVLVSDIRMPGMDGIALLNQVHQRTPELPVII
MTAHSDLDAAVNAYQQGAFEYLPKPFDVDETLTLVERAIAHGQEQRKTSHRPSENYSAPEIIGEAPAMQEVFRAIGRLSR
SSISVLINGESGTGKELVAHALHRHSPRAQKPFIALNMAAIPKDLIESELFGHEKGAFTGANTVRQGRFEQANGGTLFLD
EIGDMPLDIQTRLLRVLADGQFYRVGGHVAIKVDVRIVAATHQNLEKLVHQGKFREDLFHRLNVIRIHIPSLRERRQDIE
KLTKHFLALAAKELGVEMKTLNPRTVDILTKLDWPGNVRQLENMCRWLTVMASGSEVLPSDLPSELLSERKASHFDNDIS
WQKQLETWAKSALASGETELLAYALPEFERILLEAALHHTNGHKQEAAKVLGWGRNTLTRKLKELY

Nucleotide

• Length: 1401 bp

>NTDB_id=519700 K1T74_RS00885 WP_000086389.1 182426..183826(-) (luxO) [Vibrio cholerae strain ICDC-VC702]
ATGAGTAGAGGATACGTCTGGGTTGTCGATGATGATAGTTCCATTCGCTGGGTAATGGAGAAAACGCTCTCTTCAGCCCA
TATAAAATGCGAAACCTTCGCAGATGCGGAAAGCGTACTGCTGGCACTGGAGCGTGAAACCCCCGACGTTCTTGTCTCAG
ATATTCGCATGCCAGGGATGGATGGCATTGCTCTGCTCAATCAAGTACACCAACGCACCCCTGAACTTCCGGTGATCATT
ATGACCGCGCATTCGGATCTGGATGCAGCCGTCAATGCCTACCAACAAGGTGCCTTTGAGTATCTTCCCAAGCCTTTTGA
TGTCGATGAAACCCTCACCTTAGTCGAACGTGCCATCGCTCATGGTCAAGAGCAGCGCAAGACATCTCATCGTCCCAGTG
AAAACTATTCCGCCCCTGAAATCATTGGCGAAGCGCCGGCTATGCAAGAAGTGTTTCGCGCAATTGGTCGCTTATCACGC
TCTTCGATTTCGGTATTGATCAACGGTGAATCGGGAACCGGTAAAGAATTGGTCGCTCATGCTCTGCATAGACATAGTCC
TCGTGCCCAAAAGCCGTTTATTGCCCTCAATATGGCGGCGATTCCCAAAGATCTCATCGAATCTGAACTGTTTGGCCATG
AAAAAGGCGCGTTTACTGGTGCCAATACCGTGCGCCAAGGTCGCTTCGAACAAGCCAATGGCGGCACTTTATTTCTTGAT
GAAATTGGCGATATGCCGCTCGATATTCAAACTCGGTTATTGCGCGTGTTGGCGGATGGTCAGTTTTATCGCGTTGGCGG
TCATGTCGCGATAAAAGTCGATGTGCGAATCGTCGCAGCCACTCACCAAAATCTTGAAAAACTGGTTCATCAAGGCAAAT
TTCGTGAAGACTTATTCCATCGTCTGAACGTTATTCGCATCCATATCCCGTCACTGCGTGAACGTCGACAAGATATTGAA
AAGCTCACTAAGCACTTTTTAGCGCTGGCAGCCAAAGAGCTCGGAGTGGAGATGAAAACGCTCAACCCGCGCACCGTGGA
TATTCTGACCAAGCTCGATTGGCCGGGTAACGTGCGCCAACTCGAAAACATGTGTCGCTGGCTCACGGTGATGGCAAGTG
GAAGTGAAGTGCTGCCAAGTGATCTTCCTTCCGAATTATTATCAGAAAGGAAAGCCAGCCATTTTGATAATGATATAAGT
TGGCAGAAACAGTTAGAAACATGGGCAAAATCTGCACTGGCCTCCGGTGAAACCGAGTTGCTTGCCTACGCACTCCCAGA
ATTTGAACGTATACTTTTAGAAGCGGCACTTCACCACACCAATGGACATAAACAAGAAGCCGCCAAAGTATTGGGCTGGG
GACGGAATACGCTAACACGTAAACTCAAAGAGTTATATTAA

Domains

Predicted by InterProScan.

• Sigma-54 interaction domain (Sigma54_activat) (141-308)

• Bacterial regulatory protein, Fis family (HTH_8) (425-465)

• Response regulator receiver domain (Response_reg) (6-115)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxO	Vibrio cholerae strain A1552	37.662	99.142	0.373
pilR	Pseudomonas aeruginosa PAK	37.419	99.785	0.373