Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | SA40_RS10165 | Genome accession | NC_022443 |
| Coordinates | 2057500..2057895 (-) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | Q2FWF7 |
| Organism | Staphylococcus aureus subsp. aureus SA40 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2052500..2062895
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SA40_RS10135 (SA40_1848) | thiE | 2053098..2053739 (-) | 642 | WP_000483147.1 | thiamine phosphate synthase | - |
| SA40_RS10140 (SA40_1849) | thiM | 2053741..2054532 (-) | 792 | WP_001108486.1 | hydroxyethylthiazole kinase | - |
| SA40_RS10145 (SA40_1850) | thiD | 2054516..2055346 (-) | 831 | WP_000594943.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| SA40_RS10150 (SA40_1851) | tenA | 2055339..2056028 (-) | 690 | WP_000396067.1 | thiaminase II | - |
| SA40_RS10160 (SA40_1853) | sceD | 2056416..2057111 (-) | 696 | WP_000751997.1 | lytic transglycosylase SceD | - |
| SA40_RS10165 (SA40_1854) | ssb | 2057500..2057895 (-) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| SA40_RS10170 (SA40_1855) | istB | 2058038..2058799 (-) | 762 | WP_001066124.1 | IS21-like element helper ATPase IstB | - |
| SA40_RS10175 (SA40_1856) | istA | 2058792..2060084 (-) | 1293 | WP_000777467.1 | IS21 family transposase | - |
| SA40_RS10180 (SA40_1857) | - | 2060295..2060735 (+) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| SA40_RS10185 (SA40_1858) | fabZ | 2060792..2061232 (-) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| SA40_RS10190 (SA40_1859) | murA | 2061266..2062531 (-) | 1266 | WP_000358002.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| SA40_RS10195 (SA40_1860) | - | 2062642..2062875 (-) | 234 | WP_000384520.1 | DUF1146 family protein | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=51957 SA40_RS10165 WP_000932694.1 2057500..2057895(-) (ssb) [Staphylococcus aureus subsp. aureus SA40]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=51957 SA40_RS10165 WP_000932694.1 2057500..2057895(-) (ssb) [Staphylococcus aureus subsp. aureus SA40]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |