Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   ICN77_RS01995 Genome accession   NZ_CP066376
Coordinates   298546..299442 (+) Length   298 a.a.
NCBI ID   WP_002456718.1    Uniprot ID   A0A2T4LGX3
Organism   Staphylococcus epidermidis strain PH1-28     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 293546..304442
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ICN77_RS01975 (ICN77_000250) - 294233..295776 (+) 1544 Protein_246 NAD(P)H-binding protein -
  ICN77_RS01980 (ICN77_000251) - 295899..297368 (-) 1470 WP_002456720.1 alkaline phosphatase -
  ICN77_RS01985 (ICN77_000252) - 297665..297844 (+) 180 WP_002456719.1 hypothetical protein -
  ICN77_RS01990 (ICN77_000253) braR 297875..298540 (+) 666 WP_001830679.1 response regulator transcription factor Regulator
  ICN77_RS01995 (ICN77_000254) braS 298546..299442 (+) 897 WP_002456718.1 sensor histidine kinase Regulator
  ICN77_RS02000 (ICN77_000255) - 299553..300302 (+) 750 WP_198895790.1 ABC transporter ATP-binding protein -
  ICN77_RS02005 (ICN77_000256) - 300304..302316 (+) 2013 WP_198895791.1 ABC transporter permease -
  ICN77_RS02010 (ICN77_000257) - 302420..303010 (+) 591 WP_002485462.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 298 a.a.        Molecular weight: 34883.51 Da        Isoelectric Point: 6.8361

>NTDB_id=519523 ICN77_RS01995 WP_002456718.1 298546..299442(+) (braS) [Staphylococcus epidermidis strain PH1-28]
MKFAYIQSIRNEISIILIILLFFALIFYVFSLPFDAYVLAISIILLLMCVRWWIKYLSFKKNEHLKDKVAYLEHELAHVK
NQQIEYRNDVESYFLTWVHQIKTPITASQLLLERNEENVVNRVRQEIVHIDNYTSLALSYLKLLNEESDMTITKVTVDDL
IRPLILKYRIQFIEQKTQIHYEKSEDIILTDAQWASIMIEQLLNNALKYAKGKDIWIDFDVANQTLQIKDNGIGISKADI
PKIFDKGYSGFNGRLNEQSTGIGLFIVQHIANHLNIQVTVQSELNHGTVFFIHFTKEK

Nucleotide


Download         Length: 897 bp        

>NTDB_id=519523 ICN77_RS01995 WP_002456718.1 298546..299442(+) (braS) [Staphylococcus epidermidis strain PH1-28]
ATGAAGTTTGCATATATTCAATCGATTCGTAATGAGATTTCAATTATTTTAATAATTCTATTATTTTTTGCACTTATATT
TTATGTGTTTTCTTTACCTTTTGATGCATACGTACTAGCAATCAGTATCATATTACTATTGATGTGTGTACGTTGGTGGA
TAAAGTATTTAAGTTTTAAAAAGAATGAACATCTTAAAGATAAAGTAGCATATTTAGAACATGAGTTAGCACATGTTAAG
AATCAGCAAATTGAATATCGTAACGATGTTGAAAGTTATTTTTTAACATGGGTACATCAAATTAAAACACCTATCACTGC
CTCACAATTACTTTTGGAGAGAAACGAGGAGAATGTAGTTAATCGTGTTCGACAAGAAATTGTGCACATTGATAATTATA
CAAGTCTCGCATTAAGTTATTTAAAATTATTAAATGAAGAGTCAGATATGACAATTACCAAAGTGACAGTTGATGATTTG
ATTCGCCCGTTGATTTTAAAATATAGAATTCAGTTTATTGAACAAAAGACGCAAATCCATTATGAAAAAAGTGAGGACAT
TATTTTAACCGATGCACAATGGGCTTCTATAATGATAGAGCAACTTTTAAATAATGCTTTAAAATATGCTAAAGGTAAAG
ATATTTGGATAGATTTTGATGTTGCCAATCAAACTCTACAGATTAAAGATAATGGTATTGGGATTAGTAAAGCAGATATT
CCTAAAATTTTTGATAAAGGATACTCAGGATTTAACGGTAGATTGAATGAACAATCAACTGGTATAGGTCTATTTATAGT
GCAACACATTGCAAATCATTTAAATATACAAGTAACTGTACAATCAGAGTTGAATCATGGGACAGTATTTTTTATACATT
TTACTAAAGAAAAATAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(197-296)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2T4LGX3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

60.339

98.993

0.597