Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   GKQ51_RS20735 Genome accession   NZ_CP066310
Coordinates   4384122..4384529 (-) Length   135 a.a.
NCBI ID   WP_039808301.1    Uniprot ID   A0A4Q9VC40
Organism   Azotobacter chroococcum strain HR1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4379122..4389529
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GKQ51_RS20715 (GKQ51_20715) - 4379936..4380781 (-) 846 WP_269820049.1 CheR family methyltransferase -
  GKQ51_RS20720 (GKQ51_20720) - 4380885..4382933 (-) 2049 WP_198866865.1 methyl-accepting chemotaxis protein -
  GKQ51_RS20725 (GKQ51_20725) - 4383119..4383658 (-) 540 WP_198866866.1 chemotaxis protein CheW -
  GKQ51_RS20730 (GKQ51_20730) pilH 4383710..4384075 (-) 366 WP_039806737.1 twitching motility response regulator PilH -
  GKQ51_RS20735 (GKQ51_20735) pilG 4384122..4384529 (-) 408 WP_039808301.1 twitching motility response regulator PilG Regulator
  GKQ51_RS20740 (GKQ51_20740) gshB 4384761..4385717 (+) 957 WP_039806739.1 glutathione synthase -
  GKQ51_RS20745 (GKQ51_20745) - 4385817..4386710 (+) 894 WP_198866867.1 energy transducer TonB -
  GKQ51_RS20750 (GKQ51_20750) - 4386797..4387363 (+) 567 WP_377802447.1 YqgE/AlgH family protein -
  GKQ51_RS20755 (GKQ51_20755) ruvX 4387360..4387788 (+) 429 WP_039806749.1 Holliday junction resolvase RuvX -
  GKQ51_RS20760 (GKQ51_20760) pyrR 4387833..4388342 (+) 510 WP_039806751.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  GKQ51_RS20765 (GKQ51_20765) - 4388361..4389377 (+) 1017 WP_089169561.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14822.23 Da        Isoelectric Point: 7.2441

>NTDB_id=519264 GKQ51_RS20735 WP_039808301.1 4384122..4384529(-) (pilG) [Azotobacter chroococcum strain HR1]
MEQHSDGLKVMVIDDSKTIRRTAETLLKKVGCEVITAVDGFDALAKIADGHPRIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIRAHVPDFVPVEQAS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=519264 GKQ51_RS20735 WP_039808301.1 4384122..4384529(-) (pilG) [Azotobacter chroococcum strain HR1]
ATGGAACAGCATTCCGACGGTTTGAAGGTCATGGTGATCGACGATTCCAAGACGATTCGTCGCACTGCGGAAACTCTGCT
GAAGAAGGTGGGGTGCGAGGTCATCACCGCCGTGGACGGCTTCGATGCCCTGGCCAAGATCGCCGATGGCCATCCGCGGA
TCATCTTCGTCGATATCATGATGCCGCGACTGGACGGCTATCAGACCTGTGCCTTGATCAAGAACAACAGCGCATTCAAG
TCCACGCCGGTGATCATGCTGTCCTCCAAGGACGGTCTGTTCGACAAGGCCAAGGGACGCATTGTCGGCTCCGACCAATA
TCTGACCAAGCCCTTCAGCAAAGAAGAGCTGCTGGGCGCGATCAGGGCCCATGTGCCCGATTTCGTCCCGGTAGAGCAAG
CATCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4Q9VC40

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

77.6

92.593

0.719
  vicR Streptococcus mutans UA159

41.27

93.333

0.385