Detailed information NTG0519246

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: GKQ51_RS06205
• Genome accession: NZ_CP066310
• Coordinates: 1328407..1330617 (+)
• Length: 736 a.a.
• NCBI ID: WP_198868014.1
• Uniprot ID: A0AAP9YHQ0
• Organism: Azotobacter chroococcum strain HR1
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1323407..1335617

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GKQ51_RS06180 (GKQ51_06180)	-	1323493..1324215 (-)	723	WP_131255085.1	glycerophosphodiester phosphodiesterase	-
GKQ51_RS06185 (GKQ51_06185)	-	1324527..1325777 (+)	1251	WP_089167527.1	lipoprotein-releasing ABC transporter permease subunit	-
GKQ51_RS06190 (GKQ51_06190)	lolD	1325785..1326468 (+)	684	WP_377802233.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
GKQ51_RS06195 (GKQ51_06195)	-	1326471..1327715 (+)	1245	WP_198867444.1	lipoprotein-releasing ABC transporter permease subunit	-
GKQ51_RS06200 (GKQ51_06200)	-	1327739..1328266 (-)	528	WP_089167530.1	DUF2062 domain-containing protein	-
GKQ51_RS06205 (GKQ51_06205)	comA	1328407..1330617 (+)	2211	WP_198868014.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
GKQ51_RS06210 (GKQ51_06210)	-	1330690..1331322 (+)	633	WP_089167532.1	MotA/TolQ/ExbB proton channel family protein	-
GKQ51_RS06215 (GKQ51_06215)	-	1331319..1331747 (+)	429	WP_089167533.1	ExbD/TolR family protein	-
GKQ51_RS06220 (GKQ51_06220)	lpxK	1331747..1332748 (+)	1002	WP_198867445.1	tetraacyldisaccharide 4'-kinase	-
GKQ51_RS06225 (GKQ51_06225)	-	1332809..1332994 (+)	186	WP_089167535.1	Trm112 family protein	-
GKQ51_RS06230 (GKQ51_06230)	kdsB	1332991..1333755 (+)	765	WP_198867446.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
GKQ51_RS06235 (GKQ51_06235)	-	1333755..1334219 (+)	465	WP_039805415.1	low molecular weight protein-tyrosine-phosphatase	-
GKQ51_RS06240 (GKQ51_06240)	murB	1334216..1335235 (+)	1020	WP_198867447.1	UDP-N-acetylmuramate dehydrogenase	-

Sequence

Protein

• Length: 736 a.a.
• Molecular weight: 79420.24 Da
• Isoelectric Point: 10.5260

>NTDB_id=519246 GKQ51_RS06205 WP_198868014.1 1328407..1330617(+) (comA) [Azotobacter chroococcum strain HR1]
MLALAAGLLVLRFLPALPPWWLWSLLLLGGCGCLALRRYRPALFLLGLGWACLSAHWALEGRLPAELDGRTLWLEGQVVG
LPERVDGTLRFQLEGALSRRAELPRRLRLAWHAGPEVRAGERWRLAVALKRPRGLVNPQGFDAEAWLLARRIGATGTVKA
GEHLGSPGTADGWRDGLRQRLQQVDAHGREGAIAALVMGDASGLSAADWHLLQDTGTVHLMVISGQHVALLAGLVYGLVA
LLARHGLWPRRLPWLPWACALALVAALGYGWLAGFGVPVQRACVMVAVVLLWRLRFRHLGFWLPLLLALVGVLLLEPLAS
LQPGFWLSFGAVAILALAFGGRLGAWSWRQTLWRAQWTSALGLLPLLLVLGLPISLSGPLANLIAVPWVSLAVVPLALLG
TLLLPLPVLGEGLLWLAGALLAALFWLLGEIAGAVPAWLPHDVPFWAWLLATLGTVLILLPAGVPLRALGLALLLPLAFP
PGVRIPPGRADVWVLDVGQGLAVLLRTRGHALLYDAGPRFGGFDLGERVVLPSLRSLGVTRLDGLLLSHADGDHAGGALA
VQRGLPLGEVIAGEARALPAALAAQPCAGRDWQWDGVRFSTWRWGAAQDGNQASCVLLVEAGGERLLLTGDIDAAAERAL
LDSHPEWRADWLLAPHHGSRSSSSRALLEALAPRAVLISRSWNNAFGHPHPEAIARYRNLPAAIYDTARQGALQFRLGDW
GRAQGLREEPRFWREK

Nucleotide

• Length: 2211 bp

>NTDB_id=519246 GKQ51_RS06205 WP_198868014.1 1328407..1330617(+) (comA) [Azotobacter chroococcum strain HR1]
ATGTTGGCGCTCGCGGCAGGCCTGCTCGTCCTGCGTTTTCTCCCGGCCCTGCCGCCCTGGTGGCTGTGGTCGCTGTTGCT
GCTGGGCGGGTGCGGCTGCCTGGCGTTGCGTCGCTATCGGCCGGCGCTGTTTCTGCTCGGCCTGGGCTGGGCCTGCCTGT
CGGCGCACTGGGCGCTGGAGGGGCGTCTGCCCGCCGAACTCGACGGCCGCACCCTGTGGCTGGAAGGGCAGGTGGTCGGC
CTGCCGGAGCGGGTCGACGGCACGTTGCGCTTCCAGTTGGAGGGTGCGCTGTCCCGGCGTGCCGAATTGCCCCGGCGCCT
GCGCCTGGCCTGGCATGCCGGGCCGGAGGTCCGCGCCGGCGAGCGCTGGCGCCTGGCGGTTGCCCTCAAGCGCCCGCGCG
GCCTGGTCAATCCGCAGGGGTTCGATGCCGAGGCCTGGCTGCTGGCCCGGCGCATCGGTGCCACTGGTACGGTGAAGGCC
GGGGAGCATCTTGGATCACCAGGCACGGCCGACGGCTGGCGCGACGGCCTGCGCCAGCGCCTGCAGCAGGTCGATGCCCA
TGGCCGTGAAGGCGCTATCGCCGCACTGGTGATGGGCGATGCCTCGGGGCTGAGCGCGGCGGACTGGCACCTTCTGCAGG
ACACCGGCACCGTGCATCTGATGGTGATCTCCGGTCAGCATGTCGCCCTGCTCGCCGGCCTGGTCTACGGACTGGTCGCC
CTGCTGGCGCGTCACGGCCTGTGGCCGCGGCGCCTGCCCTGGTTGCCCTGGGCGTGCGCGCTGGCCCTGGTCGCGGCCTT
GGGCTACGGCTGGCTGGCCGGTTTCGGGGTGCCGGTGCAGCGGGCCTGCGTCATGGTCGCCGTGGTACTGCTCTGGCGCC
TGCGCTTTCGCCACCTGGGGTTCTGGCTGCCCCTGCTGCTGGCGCTGGTCGGGGTGCTGCTGCTCGAGCCGCTGGCCAGC
CTGCAGCCGGGGTTCTGGCTGTCGTTCGGCGCGGTGGCGATTCTCGCCCTGGCCTTTGGCGGTCGGCTGGGCGCCTGGTC
GTGGCGACAGACCCTGTGGCGGGCCCAGTGGACCAGCGCGCTGGGGCTGTTGCCGCTGCTGCTGGTCCTGGGGTTGCCGA
TCAGTCTCAGCGGCCCGCTGGCCAATCTGATCGCGGTGCCATGGGTCAGCCTTGCGGTGGTGCCGCTGGCGCTGCTCGGA
ACCCTGTTGCTGCCCCTGCCGGTGCTGGGCGAGGGCCTGCTCTGGTTGGCCGGCGCCTTGCTGGCGGCGCTGTTCTGGCT
GCTCGGCGAGATCGCCGGCGCCGTGCCGGCCTGGCTGCCCCATGACGTGCCGTTCTGGGCCTGGCTGCTGGCGACGCTCG
GGACCGTGCTGATCCTGTTGCCGGCTGGGGTGCCGCTGCGCGCCCTGGGGCTGGCGCTGCTGCTGCCCCTGGCATTTCCA
CCCGGGGTGCGGATTCCGCCCGGTCGGGCCGATGTCTGGGTGCTGGATGTCGGTCAGGGGCTCGCCGTGCTCCTGCGCAC
CCGCGGGCATGCCCTGCTCTATGACGCGGGGCCGCGCTTCGGCGGTTTCGACCTGGGCGAGCGGGTAGTCCTGCCCTCGC
TGCGCAGTCTTGGCGTGACCCGCCTGGACGGCCTGCTGCTCAGCCATGCCGACGGCGACCACGCCGGGGGTGCCCTGGCC
GTGCAGCGCGGCTTGCCGCTGGGCGAGGTCATCGCCGGCGAGGCACGGGCGCTGCCGGCGGCGCTCGCCGCCCAGCCTTG
CGCCGGCCGGGACTGGCAATGGGATGGCGTGCGTTTCTCCACCTGGCGCTGGGGCGCTGCGCAGGACGGCAATCAGGCGT
CCTGCGTGCTGCTGGTGGAGGCCGGCGGCGAGCGTCTGCTGCTGACCGGCGATATCGATGCCGCGGCCGAGCGGGCGCTG
CTCGACAGCCATCCGGAGTGGCGCGCCGACTGGCTGCTGGCGCCGCACCATGGCAGTCGCAGCTCGTCCTCGCGAGCGCT
GCTCGAGGCCCTGGCGCCGCGCGCCGTGCTGATCTCGCGCAGCTGGAACAACGCCTTCGGCCACCCGCATCCGGAGGCCA
TCGCACGCTATCGAAACCTGCCGGCGGCGATCTACGATACCGCCCGTCAGGGCGCCCTGCAGTTCCGCCTGGGGGACTGG
GGCAGGGCGCAGGGGCTGCGCGAAGAGCCCCGCTTCTGGCGGGAAAAATGA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (496-677)

• Domain of unknown function (DUF4131) (DUF4131) (17-163)

• Competence protein (Competence) (196-461)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	67.903	95.245	0.647
comA	Ralstonia pseudosolanacearum GMI1000	34.736	100	0.393