Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   IGS65_RS05805 Genome accession   NZ_CP066294
Coordinates   1190916..1191641 (-) Length   241 a.a.
NCBI ID   WP_002262608.1    Uniprot ID   A0AAX1K0Q1
Organism   Streptococcus mutans strain 27-3     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1185916..1196641
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IGS65_RS05770 (IGS65_005770) - 1186087..1186383 (-) 297 WP_002263922.1 YlxR family protein -
  IGS65_RS05775 (IGS65_005775) nusA 1186401..1187594 (-) 1194 WP_192072077.1 transcription termination factor NusA -
  IGS65_RS05780 (IGS65_005780) rimP 1187630..1188121 (-) 492 WP_002267543.1 ribosome maturation factor RimP -
  IGS65_RS05790 (IGS65_005790) trmB 1188393..1189028 (-) 636 WP_002265651.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  IGS65_RS05795 (IGS65_005795) - 1189038..1189820 (-) 783 WP_002273963.1 phosphotransferase family protein -
  IGS65_RS05800 (IGS65_005800) pptB 1189879..1190913 (-) 1035 WP_002286148.1 ABC transporter permease Regulator
  IGS65_RS05805 (IGS65_005805) pptA 1190916..1191641 (-) 726 WP_002262608.1 ABC transporter ATP-binding protein Regulator
  IGS65_RS05810 (IGS65_005810) - 1191706..1192125 (+) 420 WP_002262609.1 HIT family protein -
  IGS65_RS05815 (IGS65_005815) - 1192122..1192406 (+) 285 WP_002262610.1 hypothetical protein -
  IGS65_RS05820 (IGS65_005820) brpA 1192586..1193806 (-) 1221 WP_002267779.1 biofilm formation/cell division transcriptional regulator BrpA -
  IGS65_RS05825 (IGS65_005825) tsaE 1194137..1194580 (-) 444 WP_002272923.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  IGS65_RS05830 (IGS65_005830) - 1194709..1196139 (-) 1431 WP_002267778.1 NCS2 family permease -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26686.26 Da        Isoelectric Point: 4.9888

>NTDB_id=519133 IGS65_RS05805 WP_002262608.1 1190916..1191641(-) (pptA) [Streptococcus mutans strain 27-3]
MLKIENLTGGYVNIPVLKNISFEVADGELVGLIGLNGAGKSTTINEIIGLLQPYEGKISIDGLTLADQEMAYRKKIGFIP
ETPSLYEELTLKEHLEMIAMAYDIKVEAALARAQKLLELFRLEDKLDWFPIHFSKGMKQKVMIICAFIIDPSLFIVDEPF
LGLDPVAISDLTQLLAAEKAKGKSILMSTHVLDSAEKMCDRFVILHHGQIRAQGSLADLRMTFGNAQASLNDIYMTLTKE
G

Nucleotide


Download         Length: 726 bp        

>NTDB_id=519133 IGS65_RS05805 WP_002262608.1 1190916..1191641(-) (pptA) [Streptococcus mutans strain 27-3]
ATGTTAAAAATAGAAAATTTGACCGGTGGTTACGTCAACATTCCTGTCTTGAAAAATATCAGTTTTGAGGTTGCTGATGG
TGAGTTGGTCGGGCTCATAGGCCTCAATGGTGCAGGAAAATCAACAACTATCAATGAAATTATTGGACTTTTGCAGCCTT
ATGAAGGCAAAATCAGTATTGATGGACTGACGCTTGCAGATCAAGAAATGGCTTATCGAAAGAAAATTGGGTTTATTCCA
GAAACACCTAGCCTTTACGAAGAATTAACCTTAAAAGAGCACTTGGAAATGATAGCCATGGCTTATGATATTAAAGTGGA
AGCAGCTTTGGCGCGTGCGCAAAAACTGCTGGAACTTTTTAGATTAGAAGATAAACTGGATTGGTTTCCTATTCATTTTT
CCAAAGGAATGAAACAAAAGGTCATGATTATCTGTGCTTTTATCATTGATCCGAGTCTTTTTATTGTTGATGAGCCTTTC
TTGGGATTGGATCCTGTTGCCATTTCAGATTTGACTCAGCTTTTGGCAGCAGAAAAGGCTAAGGGAAAATCCATTTTGAT
GTCAACTCATGTTTTGGATTCTGCTGAAAAGATGTGTGATCGCTTTGTTATTTTACATCATGGACAAATCCGAGCTCAAG
GAAGTCTCGCTGATTTACGAATGACTTTTGGAAATGCACAAGCCAGCCTTAACGATATCTATATGACTTTGACTAAAGAG
GGTTGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

76.987

99.17

0.763
  pptA Streptococcus salivarius strain HSISS4

76.569

99.17

0.759