Detailed information NTG0519014

Bioinformatically predicted

Overview

• Name: tsaP
• Type: Machinery gene
• Locus tag: KZ794_RS30020
• Genome accession: NZ_CP080280
• Coordinates: 6497223..6498248 (-)
• Length: 341 a.a.
• NCBI ID: WP_003097294.1
• Uniprot ID: A0A0H2ZJL6
• Organism: Pseudomonas aeruginosa strain UNC_PaerCF20
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 6492223..6503248

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KZ794_RS29995 (KZ794_29995)	aroE	6492425..6493249 (-)	825	WP_023083578.1	shikimate dehydrogenase	-
KZ794_RS30000 (KZ794_30000)	hemF	6493307..6494224 (-)	918	WP_003097311.1	oxygen-dependent coproporphyrinogen oxidase	-
KZ794_RS30005 (KZ794_30005)	-	6494415..6495392 (+)	978	WP_023083579.1	NADPH:quinone reductase	-
KZ794_RS30010 (KZ794_30010)	-	6495402..6495959 (-)	558	WP_016561457.1	L-threonylcarbamoyladenylate synthase	-
KZ794_RS30015 (KZ794_30015)	dprA	6496000..6497088 (-)	1089	WP_003118479.1	DNA-processing protein DprA	Machinery gene
KZ794_RS30020 (KZ794_30020)	tsaP	6497223..6498248 (-)	1026	WP_003097294.1	LysM peptidoglycan-binding domain-containing protein	Machinery gene
KZ794_RS30025 (KZ794_30025)	def	6498387..6498893 (+)	507	WP_003107059.1	peptide deformylase	-
KZ794_RS30030 (KZ794_30030)	fmt	6498948..6499892 (+)	945	WP_010793609.1	methionyl-tRNA formyltransferase	-
KZ794_RS30035 (KZ794_30035)	rsmB	6499889..6501193 (+)	1305	WP_003122291.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
KZ794_RS30040 (KZ794_30040)	trkA	6501220..6502593 (+)	1374	WP_003107053.1	Trk system potassium transporter TrkA	-
KZ794_RS30045 (KZ794_30045)	-	6502742..6503059 (+)	318	WP_003120685.1	tetratricopeptide repeat protein	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37586.01 Da
• Isoelectric Point: 9.3358

>NTDB_id=519014 KZ794_RS30020 WP_003097294.1 6497223..6498248(-) (tsaP) [Pseudomonas aeruginosa strain UNC_PaerCF20]
MRKSLVALLLLAASGLAQAQVDLREGHPDRYTVVRGDTLWDISGKFLRQPWKWPELWHANPQIQNPHLIYPGDTLSLVYV
DGQPRLVLNRGESRGTIKLSPKIRSTPIAEAIPTIPLDKINSFLLANRIVDDEKTFTSAPYIVAGNAERIVSGTGDRIYA
RGKFADGQPAYGIFRQGKVYIDPKTKEVLGINADDIGGGEVVATEGDVATLALTRTTQEVRLGDRLFPTEERAVNSTFMP
GEPSREVKGEIIDVPRGVTQIGQFDVVTLNRGQRDGLAEGNVLAIYKVGETVRDRVTGESVKIPDERAGLLMVFRTYKKL
SYALVLMASRPLSVTDRVQNP

Nucleotide

• Length: 1026 bp

>NTDB_id=519014 KZ794_RS30020 WP_003097294.1 6497223..6498248(-) (tsaP) [Pseudomonas aeruginosa strain UNC_PaerCF20]
ATGAGGAAATCACTAGTCGCCCTTCTGCTCCTTGCCGCGAGCGGTCTGGCGCAGGCCCAGGTCGACCTCAGGGAAGGGCA
TCCGGACCGCTACACGGTGGTCAGGGGCGATACCCTGTGGGACATCTCGGGGAAATTCCTCCGCCAGCCATGGAAGTGGC
CGGAACTCTGGCACGCCAACCCGCAGATCCAGAATCCACATCTGATCTACCCCGGCGACACCCTCAGCCTGGTCTACGTC
GATGGCCAGCCGCGCCTGGTGCTGAACCGTGGCGAATCGCGCGGGACCATCAAGCTGTCGCCGAAGATCCGCAGCACGCC
GATCGCCGAGGCCATCCCGACCATCCCGCTGGACAAGATCAACAGCTTCCTGCTGGCCAACCGCATCGTCGATGACGAGA
AGACCTTCACCAGTGCGCCGTACATCGTCGCCGGCAACGCCGAGCGGATCGTCAGCGGCACCGGCGACCGCATCTACGCT
CGCGGCAAGTTCGCCGACGGCCAGCCGGCCTATGGCATCTTCCGCCAGGGCAAGGTCTACATCGATCCGAAGACCAAGGA
AGTCCTCGGCATCAACGCCGACGACATCGGCGGCGGCGAGGTGGTGGCCACCGAAGGCGACGTCGCGACCCTGGCGCTGA
CCCGCACCACCCAGGAAGTGCGCCTGGGCGACCGCCTGTTCCCCACCGAGGAGCGTGCGGTGAATTCCACCTTCATGCCC
GGCGAGCCGAGCCGCGAGGTGAAGGGCGAAATCATCGACGTACCGCGCGGCGTGACCCAGATCGGCCAGTTCGACGTGGT
CACCCTGAACCGTGGCCAGCGCGACGGGCTGGCCGAGGGCAACGTGCTGGCGATCTACAAGGTCGGCGAGACGGTGCGCG
ACCGCGTTACCGGTGAGTCGGTGAAGATTCCCGACGAACGCGCCGGCCTGCTGATGGTGTTCCGTACCTACAAGAAGCTG
AGCTACGCCCTGGTTCTGATGGCCAGCAGGCCGCTCTCGGTAACCGACAGGGTGCAGAATCCCTGA

Domains

Predicted by InterProScan.

• LysM domain (LysM) (31-76)

3D structure

• AlphaFold DB: A0A0H2ZJL6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
tsaP	Acinetobacter baumannii D1279779	36.512	100	0.393