Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   I9H07_RS21855 Genome accession   NZ_CP066265
Coordinates   4932892..4933302 (-) Length   136 a.a.
NCBI ID   WP_007252030.1    Uniprot ID   -
Organism   Pseudomonas syringae strain PA-2-9E     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4927892..4938302
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I9H07_RS21840 (I9H07_21715) - 4929828..4931870 (-) 2043 WP_024671844.1 methyl-accepting chemotaxis protein -
  I9H07_RS21845 (I9H07_21720) - 4931926..4932465 (-) 540 WP_024671843.1 chemotaxis protein CheW -
  I9H07_RS21850 (I9H07_21725) pilH 4932480..4932845 (-) 366 WP_003316741.1 twitching motility response regulator PilH -
  I9H07_RS21855 (I9H07_21730) pilG 4932892..4933302 (-) 411 WP_007252030.1 twitching motility response regulator PilG Regulator
  I9H07_RS21860 (I9H07_21735) gshB 4933549..4934508 (+) 960 WP_236424204.1 glutathione synthase -
  I9H07_RS21865 (I9H07_21740) - 4934672..4935574 (+) 903 WP_024671841.1 energy transducer TonB -
  I9H07_RS21870 (I9H07_21745) - 4935650..4936222 (+) 573 WP_024671840.1 YqgE/AlgH family protein -
  I9H07_RS21875 (I9H07_21750) ruvX 4936222..4936662 (+) 441 WP_024671839.1 Holliday junction resolvase RuvX -
  I9H07_RS21880 (I9H07_21755) pyrR 4936761..4937273 (+) 513 WP_024671838.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  I9H07_RS21885 (I9H07_21760) - 4937286..4938290 (+) 1005 WP_024645441.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 136 a.a.        Molecular weight: 14998.46 Da        Isoelectric Point: 8.5316

>NTDB_id=519013 I9H07_RS21855 WP_007252030.1 4932892..4933302(-) (pilG) [Pseudomonas syringae strain PA-2-9E]
MEQHASALKVMVIDDSKTIRRTAETLLRNAGCEVITAIDGFDALAKIADNHPRIIFVDIMMPRLDGYQTCALIKNNRAFK
STPVIMLSSKDGLFDKAKGRIVGSDQFLTKPFNKEELLSAIKAHVPGFVAAEQHLS

Nucleotide


Download         Length: 411 bp        

>NTDB_id=519013 I9H07_RS21855 WP_007252030.1 4932892..4933302(-) (pilG) [Pseudomonas syringae strain PA-2-9E]
ATGGAACAACACGCCTCCGCCTTGAAAGTCATGGTCATCGATGACTCGAAGACCATCCGCCGCACCGCCGAAACGCTGCT
CAGAAACGCAGGTTGCGAAGTCATCACTGCGATAGACGGTTTCGACGCCCTGGCCAAGATCGCCGATAACCACCCGCGAA
TCATATTCGTCGATATCATGATGCCGCGTCTGGACGGTTATCAGACCTGCGCGCTGATCAAGAACAACCGGGCATTCAAG
TCCACGCCGGTCATCATGCTGTCGTCGAAGGACGGGCTGTTCGACAAGGCCAAGGGGCGGATCGTCGGTTCCGACCAGTT
TTTGACCAAGCCTTTCAACAAGGAAGAACTGCTCAGCGCGATCAAGGCTCATGTGCCTGGCTTCGTTGCAGCAGAACAAC
ATCTATCGTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.4

91.912

0.684