Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   SCIM_RS08130 Genome accession   NC_018073
Coordinates   1677446..1678717 (-) Length   423 a.a.
NCBI ID   WP_003076026.1    Uniprot ID   -
Organism   Streptococcus intermedius JTH08     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1672446..1683717
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SCIM_RS08115 (SCIM_1472) - 1673155..1674459 (-) 1305 WP_037589417.1 bifunctional folylpolyglutamate synthase/dihydrofolate synthase -
  SCIM_RS08120 (SCIM_1473) - 1674661..1675299 (-) 639 WP_003075800.1 hypothetical protein -
  SCIM_RS08125 (SCIM_1474) - 1675553..1677412 (-) 1860 WP_003075896.1 proline--tRNA ligase -
  SCIM_RS08130 (SCIM_1475) eeP 1677446..1678717 (-) 1272 WP_003076026.1 M50 family metallopeptidase Regulator
  SCIM_RS08135 (SCIM_1476) - 1678869..1679672 (-) 804 WP_003074045.1 phosphatidate cytidylyltransferase -
  SCIM_RS08140 (SCIM_1477) - 1679681..1680430 (-) 750 WP_003074042.1 isoprenyl transferase -
  SCIM_RS08145 (SCIM_1478) yajC 1680898..1681236 (-) 339 WP_003076043.1 preprotein translocase subunit YajC -

Sequence

Protein


Download         Length: 423 a.a.        Molecular weight: 45763.57 Da        Isoelectric Point: 9.5024

>NTDB_id=51893 SCIM_RS08130 WP_003076026.1 1677446..1678717(-) (eeP) [Streptococcus intermedius JTH08]
MQSGIIGIVTFIIIFGIIVVVHEFGHFYFAKKSGILVREFSIGMGPKIFAHIGKDGTAYTIRMLPLGGYVRMAGWGDDAT
EIKTGTPASLTLNEASKVIRINLSGKKIDQTALPMNVTGFDLEDKLEITGLVLDEQKTYAVDHDATIVEEDGTEVRIAPL
DVQYQNASLGGRLITNFAGPMNNFILGIVAFLLLIFMQGGVADQHTNHVRILQGSVLAQAGVKNNDQILKVGQAEIKNWS
DLTQAVQSETKASKGQAELTITVKSGNKIQKLTVKPKKEQGRYLLGVMPGLKSDLPSMIAGGFSMAWNASFRIFAALKNL
IFHPDINKLGGPVAIYKASSDAAKGGLESVIALLAMLSLNIGIFNLIPIPALDGGKIVLNLLEAIRRKPLKQETETYVTL
AGVAVMVVLLIAVTWNDIMRTFF

Nucleotide


Download         Length: 1272 bp        

>NTDB_id=51893 SCIM_RS08130 WP_003076026.1 1677446..1678717(-) (eeP) [Streptococcus intermedius JTH08]
ATGCAATCAGGTATTATAGGAATCGTTACCTTTATCATTATTTTTGGAATTATTGTTGTCGTTCATGAATTTGGACATTT
CTATTTTGCGAAAAAATCAGGCATTTTGGTACGCGAGTTTTCCATTGGAATGGGTCCAAAAATTTTTGCTCATATTGGCA
AAGATGGGACAGCATATACTATTCGGATGTTACCGCTAGGTGGCTATGTTCGTATGGCAGGCTGGGGTGATGACGCAACA
GAGATTAAGACGGGAACACCTGCTAGTTTGACTTTAAATGAAGCAAGCAAGGTTATCCGAATCAATCTTTCGGGCAAGAA
AATCGACCAGACGGCTTTGCCCATGAATGTGACAGGCTTTGATTTGGAAGATAAGCTTGAAATCACTGGTTTGGTACTAG
ATGAGCAAAAAACGTATGCGGTTGACCATGACGCAACAATCGTAGAAGAAGACGGTACAGAAGTGAGGATTGCACCACTT
GATGTCCAATATCAAAATGCCAGCCTTGGTGGTCGCCTCATTACCAATTTTGCGGGACCAATGAACAACTTCATTTTGGG
AATTGTAGCTTTTTTGCTGTTGATTTTTATGCAGGGTGGTGTTGCAGATCAACATACAAACCATGTTCGGATTTTACAGG
GTAGTGTCCTAGCTCAAGCCGGTGTAAAAAATAATGACCAAATTTTAAAAGTTGGTCAAGCAGAGATCAAGAATTGGTCA
GATTTGACTCAAGCTGTTCAGTCTGAGACGAAAGCTAGCAAAGGACAGGCAGAACTAACCATAACTGTTAAAAGTGGAAA
TAAAATTCAAAAGCTTACAGTTAAGCCCAAAAAAGAGCAAGGCAGATATTTATTAGGAGTAATGCCAGGCTTGAAGTCGG
ATCTTCCATCGATGATCGCAGGTGGGTTTAGCATGGCTTGGAATGCTAGCTTCCGCATCTTTGCAGCTTTGAAAAATTTG
ATTTTCCACCCAGATATCAATAAATTGGGGGGGCCTGTGGCCATTTACAAAGCTAGTAGTGATGCTGCCAAAGGTGGGCT
TGAAAGTGTTATCGCTCTATTGGCTATGCTTTCTCTAAACATCGGTATTTTTAATCTCATTCCTATTCCCGCACTTGATG
GTGGAAAGATTGTTCTCAACCTTCTTGAAGCCATTCGTCGCAAACCATTAAAGCAGGAGACAGAAACCTATGTCACTTTA
GCAGGTGTCGCTGTTATGGTGGTGCTGTTAATTGCAGTCACGTGGAATGATATTATGCGAACCTTTTTTTAA

Domains

Predicted by InterproScan.

Peptidase family M50 (Peptidase_M50)

(10-409)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

65.072

98.818

0.643
  eeP Streptococcus thermophilus LMD-9

64.833

98.818

0.641

Multiple sequence alignment