Detailed information NTG0518844

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: KZ312_RS02370
• Genome accession: NZ_CP080260
• Coordinates: 508606..509631 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain 135
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 503606..514631

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KZ312_RS02340 (KZ312_02340)	zapB	503690..503935 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
KZ312_RS02345 (KZ312_02345)	rraA	504020..504505 (-)	486	WP_001590974.1	ribonuclease E activity regulator RraA	-
KZ312_RS02350 (KZ312_02350)	menA	504598..505524 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
KZ312_RS02355 (KZ312_02355)	hslU	505591..506922 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
KZ312_RS02360 (KZ312_02360)	hslV	506932..507462 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
KZ312_RS02365 (KZ312_02365)	ftsN	507555..508514 (-)	960	WP_000068834.1	cell division protein FtsN	-
KZ312_RS02370 (KZ312_02370)	cytR	508606..509631 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
KZ312_RS02375 (KZ312_02375)	priA	509787..511985 (-)	2199	WP_001309112.1	primosomal protein N'	Machinery gene
KZ312_RS02380 (KZ312_02380)	rpmE	512188..512400 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
KZ312_RS02385 (KZ312_02385)	yiiX	512461..513069 (-)	609	WP_000702310.1	YiiX family permuted papain-like enzyme	-
KZ312_RS02390 (KZ312_02390)	metJ	513129..513446 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=518844 KZ312_RS02370 WP_000644904.1 508606..509631(-) (cytR) [Escherichia coli strain 135]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=518844 KZ312_RS02370 WP_000644904.1 508606..509631(-) (cytR) [Escherichia coli strain 135]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCAAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGTTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCTGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628