Detailed information
Bioinformatically predicted
Overview
| Name | CJE1441 | Type | Regulator |
| Locus tag | IOO20_RS07040 | Genome accession | NZ_CP066241 |
| Coordinates | 1344251..1344904 (+) | Length | 217 a.a. |
| NCBI ID | WP_011049930.1 | Uniprot ID | A0A3X8NAQ4 |
| Organism | Campylobacter jejuni strain RM1221 | ||
| Function | repress natural transformation (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 1330030..1380425 | 1344251..1344904 | within | 0 |
Gene organization within MGE regions
Location: 1330030..1380425
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IOO20_RS06920 | - | 1330030..1331265 (-) | 1236 | WP_074482847.1 | fibronectin type III domain-containing protein | - |
| IOO20_RS06925 | - | 1331210..1332178 (-) | 969 | WP_002867338.1 | RluA family pseudouridine synthase | - |
| IOO20_RS06930 | mrdB | 1332256..1333356 (+) | 1101 | WP_002887899.1 | FtsW/RodA/SpoVE family cell cycle protein | - |
| IOO20_RS06940 | - | 1333695..1334870 (+) | 1176 | WP_002787311.1 | site-specific integrase | - |
| IOO20_RS06945 | - | 1334867..1335073 (-) | 207 | WP_002787309.1 | helix-turn-helix domain-containing protein | - |
| IOO20_RS06950 | - | 1335075..1335428 (-) | 354 | WP_002787307.1 | hypothetical protein | - |
| IOO20_RS06955 | - | 1335446..1336201 (-) | 756 | WP_002787306.1 | site-specific DNA-methyltransferase | - |
| IOO20_RS06960 | - | 1336179..1336445 (-) | 267 | WP_002787304.1 | hypothetical protein | - |
| IOO20_RS06965 | - | 1336429..1336800 (-) | 372 | WP_002858334.1 | hypothetical protein | - |
| IOO20_RS06970 | - | 1336801..1337025 (-) | 225 | WP_011049924.1 | hypothetical protein | - |
| IOO20_RS06975 | - | 1337034..1337795 (-) | 762 | WP_002869676.1 | hypothetical protein | - |
| IOO20_RS06980 | - | 1337732..1338046 (-) | 315 | WP_002787295.1 | hypothetical protein | - |
| IOO20_RS06985 | - | 1338125..1338445 (-) | 321 | WP_002787293.1 | hypothetical protein | - |
| IOO20_RS06990 | - | 1338833..1339069 (-) | 237 | WP_002787289.1 | hypothetical protein | - |
| IOO20_RS06995 | - | 1339083..1339850 (-) | 768 | WP_002787287.1 | hypothetical protein | - |
| IOO20_RS07000 | - | 1339988..1340218 (-) | 231 | WP_002787283.1 | hypothetical protein | - |
| IOO20_RS07005 | - | 1340184..1340447 (-) | 264 | WP_002787281.1 | hypothetical protein | - |
| IOO20_RS07010 | - | 1340504..1340791 (-) | 288 | WP_002787279.1 | YopX family protein | - |
| IOO20_RS07015 | - | 1340844..1341575 (-) | 732 | WP_011049928.1 | phage regulatory protein/antirepressor Ant | - |
| IOO20_RS07020 | - | 1342006..1342290 (-) | 285 | WP_002912332.1 | hypothetical protein | - |
| IOO20_RS07025 | - | 1342287..1342490 (-) | 204 | WP_002870299.1 | hypothetical protein | - |
| IOO20_RS07030 | - | 1342695..1343348 (+) | 654 | WP_002870336.1 | hypothetical protein | - |
| IOO20_RS07035 | - | 1343583..1344245 (+) | 663 | WP_002870274.1 | S24/S26 family peptidase | - |
| IOO20_RS07040 | CJE1441 | 1344251..1344904 (+) | 654 | WP_011049930.1 | DNA/RNA non-specific endonuclease | Regulator |
| IOO20_RS07045 | - | 1344921..1345202 (+) | 282 | WP_002870263.1 | PLDc N-terminal domain-containing protein | - |
| IOO20_RS07050 | - | 1345216..1345413 (-) | 198 | WP_002913413.1 | hypothetical protein | - |
| IOO20_RS07055 | - | 1345331..1345750 (-) | 420 | WP_002870261.1 | hypothetical protein | - |
| IOO20_RS07060 | - | 1345979..1346440 (-) | 462 | WP_002870260.1 | DUF5675 family protein | - |
| IOO20_RS07065 | - | 1346489..1347772 (-) | 1284 | WP_011049931.1 | hypothetical protein | - |
| IOO20_RS07070 | - | 1347769..1348143 (-) | 375 | WP_011049932.1 | DUF1353 domain-containing protein | - |
| IOO20_RS07075 | - | 1348136..1348519 (-) | 384 | WP_002869963.1 | hypothetical protein | - |
| IOO20_RS07080 | - | 1348516..1349151 (-) | 636 | WP_002789149.1 | DUF4376 domain-containing protein | - |
| IOO20_RS07085 | - | 1349164..1349613 (-) | 450 | WP_002798141.1 | hypothetical protein | - |
| IOO20_RS07090 | - | 1349615..1351180 (-) | 1566 | WP_011049933.1 | hypothetical protein | - |
| IOO20_RS07095 | - | 1351173..1351805 (-) | 633 | WP_002869967.1 | hypothetical protein | - |
| IOO20_RS07100 | - | 1351802..1352119 (-) | 318 | WP_002788295.1 | head-tail adaptor protein | - |
| IOO20_RS07105 | - | 1352132..1352569 (-) | 438 | WP_002788293.1 | phage gp6-like head-tail connector protein | - |
| IOO20_RS07110 | - | 1352566..1352817 (-) | 252 | WP_002788291.1 | hypothetical protein | - |
| IOO20_RS07115 | - | 1352828..1353994 (-) | 1167 | WP_002788288.1 | phage major capsid protein | - |
| IOO20_RS07120 | - | 1354011..1354568 (-) | 558 | WP_002788287.1 | HK97 family phage prohead protease | - |
| IOO20_RS07125 | - | 1354654..1355523 (-) | 870 | WP_002788286.1 | hypothetical protein | - |
| IOO20_RS07130 | - | 1355536..1361235 (-) | 5700 | WP_011049936.1 | hypothetical protein | - |
| IOO20_RS07135 | - | 1361295..1361633 (+) | 339 | WP_002788283.1 | hypothetical protein | - |
| IOO20_RS07140 | - | 1361625..1361840 (-) | 216 | WP_002788282.1 | hypothetical protein | - |
| IOO20_RS07145 | - | 1361921..1362277 (-) | 357 | WP_002788281.1 | hypothetical protein | - |
| IOO20_RS07150 | - | 1362274..1363254 (-) | 981 | WP_002788279.1 | hypothetical protein | - |
| IOO20_RS07155 | - | 1363426..1363776 (-) | 351 | WP_002788276.1 | hypothetical protein | - |
| IOO20_RS07160 | - | 1363777..1364319 (-) | 543 | WP_002800770.1 | HK97 gp10 family phage protein | - |
| IOO20_RS07165 | - | 1364316..1365488 (-) | 1173 | WP_002788272.1 | phage portal protein | - |
| IOO20_RS07170 | - | 1365648..1366082 (-) | 435 | WP_002913302.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| IOO20_RS07175 | - | 1366137..1367762 (-) | 1626 | WP_011049938.1 | terminase TerL endonuclease subunit | - |
| IOO20_RS07180 | - | 1367766..1368401 (-) | 636 | WP_011049939.1 | P27 family phage terminase small subunit | - |
| IOO20_RS07185 | - | 1368652..1369002 (-) | 351 | WP_002869973.1 | HNH endonuclease signature motif containing protein | - |
| IOO20_RS07190 | - | 1368989..1369279 (-) | 291 | WP_002788257.1 | hypothetical protein | - |
| IOO20_RS07200 | ktrB | 1370030..1371373 (+) | 1344 | WP_002867336.1 | TrkH family potassium uptake protein | - |
| IOO20_RS07205 | ktrA | 1371384..1372034 (+) | 651 | WP_002853664.1 | TrkA family potassium uptake protein | - |
| IOO20_RS07210 | - | 1372031..1372702 (-) | 672 | WP_002867335.1 | menaquinone biosynthetic enzyme MqnA/MqnD family protein | - |
| IOO20_RS07215 | upp | 1372708..1373334 (-) | 627 | WP_002867334.1 | uracil phosphoribosyltransferase | - |
| IOO20_RS07220 | - | 1373331..1374566 (-) | 1236 | WP_002867333.1 | malic enzyme-like NAD(P)-binding protein | - |
| IOO20_RS07225 | gltX | 1374568..1375959 (-) | 1392 | WP_011049940.1 | glutamate--tRNA ligase | - |
| IOO20_RS07230 | salC | 1376024..1376839 (+) | 816 | WP_011049941.1 | peptidylprolyl isomerase SalC | - |
| IOO20_RS07235 | accC | 1376876..1378207 (-) | 1332 | WP_002867331.1 | acetyl-CoA carboxylase biotin carboxylase subunit | - |
| IOO20_RS07240 | accB | 1378209..1378664 (-) | 456 | WP_002853623.1 | acetyl-CoA carboxylase biotin carboxyl carrier protein | - |
| IOO20_RS07245 | dcd | 1378812..1379372 (+) | 561 | WP_002859334.1 | dCTP deaminase | - |
| IOO20_RS07250 | pseB | 1379421..1380425 (+) | 1005 | WP_002859335.1 | UDP-N-acetylglucosamine 4,6-dehydratase (inverting) | - |
Sequence
Protein
Download Length: 217 a.a. Molecular weight: 25531.02 Da Isoelectric Point: 9.8742
>NTDB_id=518826 IOO20_RS07040 WP_011049930.1 1344251..1344904(+) (CJE1441) [Campylobacter jejuni strain RM1221]
MKKLIILSLLSTLAFADYTQYKPSEDFAKYFTKQNCSQVLDKFYYINCYDYSLKGTKAVAYRLEADNLKGEQIKKRPRFE
DDTNIPKKYRTTWSDYKNSGYDRGHTLSNASMRKTTQAQRSTFLMSNITPQNPQINQRVWNKIEKRERQVALKLGSLEVL
NLVNYDNNPQRIKNNIAIPSSYTKILKGDNFKECYQVPNHDVENENLRIYKVKCDNF
MKKLIILSLLSTLAFADYTQYKPSEDFAKYFTKQNCSQVLDKFYYINCYDYSLKGTKAVAYRLEADNLKGEQIKKRPRFE
DDTNIPKKYRTTWSDYKNSGYDRGHTLSNASMRKTTQAQRSTFLMSNITPQNPQINQRVWNKIEKRERQVALKLGSLEVL
NLVNYDNNPQRIKNNIAIPSSYTKILKGDNFKECYQVPNHDVENENLRIYKVKCDNF
Nucleotide
Download Length: 654 bp
>NTDB_id=518826 IOO20_RS07040 WP_011049930.1 1344251..1344904(+) (CJE1441) [Campylobacter jejuni strain RM1221]
ATGAAAAAACTTATAATCTTATCTTTATTATCCACTCTAGCTTTTGCTGATTATACACAATACAAACCAAGCGAAGATTT
TGCCAAGTATTTTACTAAACAAAACTGCTCACAAGTTTTGGATAAATTTTATTATATTAATTGTTATGATTATTCTTTAA
AAGGCACTAAAGCCGTAGCTTATAGATTAGAAGCGGATAATTTAAAAGGCGAACAAATCAAAAAACGCCCACGCTTTGAA
GATGATACAAATATTCCTAAAAAATACCGCACCACATGGAGTGATTATAAAAACAGCGGTTACGACAGGGGACACACTCT
TTCTAATGCTTCAATGAGAAAAACAACTCAAGCTCAAAGAAGCACTTTTTTAATGAGCAACATTACTCCACAAAATCCAC
AAATCAATCAAAGAGTTTGGAATAAAATTGAAAAAAGAGAAAGACAAGTAGCTTTAAAGCTTGGAAGTTTAGAAGTTTTA
AATTTGGTTAATTATGACAATAATCCACAAAGAATAAAAAACAATATTGCTATTCCAAGCTCTTACACTAAGATTTTAAA
AGGTGATAATTTTAAAGAATGTTACCAAGTGCCTAATCACGATGTAGAAAATGAGAATTTAAGAATATATAAAGTAAAAT
GTGACAATTTTTAA
ATGAAAAAACTTATAATCTTATCTTTATTATCCACTCTAGCTTTTGCTGATTATACACAATACAAACCAAGCGAAGATTT
TGCCAAGTATTTTACTAAACAAAACTGCTCACAAGTTTTGGATAAATTTTATTATATTAATTGTTATGATTATTCTTTAA
AAGGCACTAAAGCCGTAGCTTATAGATTAGAAGCGGATAATTTAAAAGGCGAACAAATCAAAAAACGCCCACGCTTTGAA
GATGATACAAATATTCCTAAAAAATACCGCACCACATGGAGTGATTATAAAAACAGCGGTTACGACAGGGGACACACTCT
TTCTAATGCTTCAATGAGAAAAACAACTCAAGCTCAAAGAAGCACTTTTTTAATGAGCAACATTACTCCACAAAATCCAC
AAATCAATCAAAGAGTTTGGAATAAAATTGAAAAAAGAGAAAGACAAGTAGCTTTAAAGCTTGGAAGTTTAGAAGTTTTA
AATTTGGTTAATTATGACAATAATCCACAAAGAATAAAAAACAATATTGCTATTCCAAGCTCTTACACTAAGATTTTAAA
AGGTGATAATTTTAAAGAATGTTACCAAGTGCCTAATCACGATGTAGAAAATGAGAATTTAAGAATATATAAAGTAAAAT
GTGACAATTTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| CJE1441 | Campylobacter jejuni RM1221 |
100 |
100 |
1 |
| CJE0566 | Campylobacter jejuni RM1221 |
91.163 |
99.078 |
0.903 |