Detailed information
Bioinformatically predicted
Overview
| Name | CJE0566 | Type | Regulator |
| Locus tag | IOO20_RS02785 | Genome accession | NZ_CP066241 |
| Coordinates | 510495..511148 (-) | Length | 217 a.a. |
| NCBI ID | WP_011049704.1 | Uniprot ID | A0A5T0PT72 |
| Organism | Campylobacter jejuni strain RM1221 | ||
| Function | repress natural transformation (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 498697..529010 | 510495..511148 | within | 0 |
Gene organization within MGE regions
Location: 498697..529010
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IOO20_RS02680 | - | 498697..499899 (+) | 1203 | WP_011049686.1 | site-specific integrase | - |
| IOO20_RS02685 | - | 499896..500066 (-) | 171 | WP_011049687.1 | helix-turn-helix domain-containing protein | - |
| IOO20_RS02690 | - | 500059..500601 (-) | 543 | WP_011049688.1 | pentapeptide repeat-containing protein | - |
| IOO20_RS02695 | - | 500611..500793 (-) | 183 | WP_041176813.1 | hypothetical protein | - |
| IOO20_RS09360 | - | 500790..501125 (-) | 336 | WP_041176814.1 | hypothetical protein | - |
| IOO20_RS02705 | - | 501179..501796 (-) | 618 | WP_011049690.1 | antA/AntB antirepressor family protein | - |
| IOO20_RS02710 | - | 501932..502327 (-) | 396 | WP_011049691.1 | hypothetical protein | - |
| IOO20_RS02715 | - | 502371..503123 (-) | 753 | WP_011049692.1 | DNA methyltransferase | - |
| IOO20_RS02720 | - | 503104..503544 (-) | 441 | WP_011049693.1 | DUF3310 domain-containing protein | - |
| IOO20_RS02725 | - | 503787..504050 (-) | 264 | WP_011049695.1 | hypothetical protein | - |
| IOO20_RS02730 | - | 504031..504726 (-) | 696 | WP_011049696.1 | hypothetical protein | - |
| IOO20_RS02735 | - | 504726..505463 (-) | 738 | WP_002873576.1 | hypothetical protein | - |
| IOO20_RS02740 | - | 505465..506319 (-) | 855 | WP_011049697.1 | lambda-exonuclease family protein | - |
| IOO20_RS02745 | - | 506321..506548 (-) | 228 | WP_002874355.1 | helix-turn-helix domain-containing protein | - |
| IOO20_RS02750 | - | 506539..506796 (-) | 258 | WP_002865124.1 | hypothetical protein | - |
| IOO20_RS02755 | - | 506787..507056 (-) | 270 | WP_002874357.1 | hypothetical protein | - |
| IOO20_RS02760 | - | 507618..507890 (-) | 273 | WP_011049699.1 | hypothetical protein | - |
| IOO20_RS02765 | - | 508070..508840 (+) | 771 | WP_041176815.1 | SEL1-like repeat protein | - |
| IOO20_RS02770 | - | 508859..509230 (-) | 372 | WP_011049701.1 | hypothetical protein | - |
| IOO20_RS02775 | - | 509220..509753 (-) | 534 | WP_011049702.1 | hypothetical protein | - |
| IOO20_RS02780 | - | 509750..510415 (-) | 666 | WP_011049703.1 | hypothetical protein | - |
| IOO20_RS02785 | CJE0566 | 510495..511148 (-) | 654 | WP_011049704.1 | DNA/RNA non-specific endonuclease | Regulator |
| IOO20_RS02790 | - | 511154..511861 (-) | 708 | WP_052805202.1 | hypothetical protein | - |
| IOO20_RS02795 | - | 511854..512642 (-) | 789 | WP_011049706.1 | HipA family kinase | - |
| IOO20_RS02800 | - | 512639..513373 (-) | 735 | WP_011049707.1 | S24 family peptidase | - |
| IOO20_RS02805 | - | 513706..514134 (+) | 429 | WP_011049709.1 | hypothetical protein | - |
| IOO20_RS02810 | - | 514131..514508 (+) | 378 | WP_011049710.1 | hypothetical protein | - |
| IOO20_RS02815 | - | 514505..515506 (+) | 1002 | WP_011049711.1 | hypothetical protein | - |
| IOO20_RS02820 | - | 515517..516164 (+) | 648 | WP_002873344.1 | hypothetical protein | - |
| IOO20_RS02825 | - | 516182..516562 (+) | 381 | WP_011049712.1 | hypothetical protein | - |
| IOO20_RS02830 | - | 516562..516948 (+) | 387 | WP_002861661.1 | terminase small subunit | - |
| IOO20_RS02835 | - | 516945..518237 (+) | 1293 | WP_011049713.1 | terminase | - |
| IOO20_RS02840 | - | 518227..518499 (+) | 273 | WP_002781524.1 | hypothetical protein | - |
| IOO20_RS02845 | - | 518480..520018 (+) | 1539 | WP_011049714.1 | hypothetical protein | - |
| IOO20_RS02850 | - | 520011..520214 (+) | 204 | WP_000931940.1 | hypothetical protein | - |
| IOO20_RS02855 | - | 520204..520851 (+) | 648 | WP_002791793.1 | hypothetical protein | - |
| IOO20_RS02860 | - | 520862..521239 (+) | 378 | WP_011049715.1 | hypothetical protein | - |
| IOO20_RS02865 | - | 521504..522715 (+) | 1212 | WP_011049716.1 | hypothetical protein | - |
| IOO20_RS02870 | - | 522715..526416 (+) | 3702 | WP_011049717.1 | PBECR2 nuclease fold domain-containing protein | - |
| IOO20_RS02875 | - | 526695..527399 (-) | 705 | WP_187145847.1 | hypothetical protein | - |
| IOO20_RS02880 | - | 527550..527756 (-) | 207 | WP_002801300.1 | hypothetical protein | - |
| IOO20_RS02885 | - | 527976..529010 (+) | 1035 | WP_011049719.1 | DUF5309 family protein | - |
Sequence
Protein
Download Length: 217 a.a. Molecular weight: 25608.19 Da Isoelectric Point: 9.7916
>NTDB_id=518814 IOO20_RS02785 WP_011049704.1 510495..511148(-) (CJE0566) [Campylobacter jejuni strain RM1221]
MKKLILLPLLSTLAFADYTQYKPSEEFAKYFTKQSCSQVLDKFYYLNCYDYNLKGTKAVAYKLEVDNLKGEQIKKRPRFE
DDTNIPKKYRTTWSDYKNSGYDRGHTLSNASMRKTTQAQRSTFLMSNITPQNPQINQRVWNKIEKRERQVASKLGSLEVL
NLVNYDNNPQRIRNQIAIPSSYIKILKGENFKECYQVPNHEVEDENIRKYKIDCDKI
MKKLILLPLLSTLAFADYTQYKPSEEFAKYFTKQSCSQVLDKFYYLNCYDYNLKGTKAVAYKLEVDNLKGEQIKKRPRFE
DDTNIPKKYRTTWSDYKNSGYDRGHTLSNASMRKTTQAQRSTFLMSNITPQNPQINQRVWNKIEKRERQVASKLGSLEVL
NLVNYDNNPQRIRNQIAIPSSYIKILKGENFKECYQVPNHEVEDENIRKYKIDCDKI
Nucleotide
Download Length: 654 bp
>NTDB_id=518814 IOO20_RS02785 WP_011049704.1 510495..511148(-) (CJE0566) [Campylobacter jejuni strain RM1221]
ATGAAAAAACTCATACTTTTACCATTGTTATCCACTCTAGCTTTTGCTGACTATACGCAATATAAACCAAGCGAAGAGTT
TGCTAAGTATTTTACTAAGCAAAGTTGTTCGCAAGTTTTAGATAAATTCTATTATCTAAATTGCTATGATTATAATCTAA
AAGGTACTAAAGCAGTGGCTTATAAATTAGAAGTAGATAATCTAAAAGGCGAACAAATCAAAAAGCGCCCGCGCTTTGAA
GATGATACAAATATCCCTAAAAAATATCGTACCACTTGGAGTGATTATAAAAATAGTGGTTATGATAGAGGACACACTCT
TTCTAATGCCTCAATGAGAAAAACAACTCAAGCTCAAAGAAGCACATTCTTAATGAGTAATATTACTCCACAAAATCCAC
AAATCAATCAAAGGGTTTGGAACAAGATTGAAAAAAGAGAAAGACAAGTAGCTTCAAAGCTTGGAAGTTTAGAAGTTTTA
AATTTAGTTAATTATGACAATAATCCACAAAGAATAAGAAATCAAATTGCTATTCCAAGCTCTTATATTAAAATCTTAAA
AGGTGAGAATTTTAAAGAATGTTACCAAGTACCAAATCATGAAGTTGAAGATGAGAATATAAGAAAATATAAGATTGATT
GTGATAAAATATAA
ATGAAAAAACTCATACTTTTACCATTGTTATCCACTCTAGCTTTTGCTGACTATACGCAATATAAACCAAGCGAAGAGTT
TGCTAAGTATTTTACTAAGCAAAGTTGTTCGCAAGTTTTAGATAAATTCTATTATCTAAATTGCTATGATTATAATCTAA
AAGGTACTAAAGCAGTGGCTTATAAATTAGAAGTAGATAATCTAAAAGGCGAACAAATCAAAAAGCGCCCGCGCTTTGAA
GATGATACAAATATCCCTAAAAAATATCGTACCACTTGGAGTGATTATAAAAATAGTGGTTATGATAGAGGACACACTCT
TTCTAATGCCTCAATGAGAAAAACAACTCAAGCTCAAAGAAGCACATTCTTAATGAGTAATATTACTCCACAAAATCCAC
AAATCAATCAAAGGGTTTGGAACAAGATTGAAAAAAGAGAAAGACAAGTAGCTTCAAAGCTTGGAAGTTTAGAAGTTTTA
AATTTAGTTAATTATGACAATAATCCACAAAGAATAAGAAATCAAATTGCTATTCCAAGCTCTTATATTAAAATCTTAAA
AGGTGAGAATTTTAAAGAATGTTACCAAGTACCAAATCATGAAGTTGAAGATGAGAATATAAGAAAATATAAGATTGATT
GTGATAAAATATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| CJE0566 | Campylobacter jejuni RM1221 |
100 |
100 |
1 |
| CJE1441 | Campylobacter jejuni RM1221 |
91.163 |
99.078 |
0.903 |