Detailed information NTG0051858

Bioinformatically predicted

Overview

• Name: sepM
• Type: Regulator
• Locus tag: SCIM_RS02265
• Genome accession: NC_018073
• Coordinates: 453481..454536 (+)
• Length: 351 a.a.
• NCBI ID: WP_003078259.1
• Uniprot ID: -
• Organism: Streptococcus intermedius JTH08
• Function: processing of CSP (predicted from homology) Competence regulation

Genomic Context

Location: 448481..459536

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SCIM_RS02235 (SCIM_0391)	-	448999..449634 (-)	636	WP_003073631.1	YigZ family protein	-
SCIM_RS02240 (SCIM_0392)	comFA/cflA	449691..450992 (+)	1302	WP_003078363.1	DEAD/DEAH box helicase	Machinery gene
SCIM_RS02245 (SCIM_0393)	-	450989..451654 (+)	666	WP_003078227.1	ComF family protein	-
SCIM_RS02250 (SCIM_0394)	hpf	451733..452275 (+)	543	WP_003073626.1	ribosome hibernation-promoting factor, HPF/YfiA family	-
SCIM_RS02255 (SCIM_0395)	rsmD	452474..453013 (+)	540	WP_003078233.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
SCIM_RS02260 (SCIM_0396)	coaD	453003..453500 (+)	498	WP_003078294.1	pantetheine-phosphate adenylyltransferase	-
SCIM_RS02265 (SCIM_0397)	sepM	453481..454536 (+)	1056	WP_003078259.1	SepM family pheromone-processing serine protease	Regulator
SCIM_RS02270 (SCIM_0398)	-	454817..455380 (+)	564	WP_004234076.1	YutD family protein	-
SCIM_RS02275 (SCIM_0399)	rlmN	455414..456496 (+)	1083	WP_003078352.1	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	-
SCIM_RS02280 (SCIM_0400)	-	456489..457007 (+)	519	WP_003078328.1	VanZ family protein	-
SCIM_RS02285 (SCIM_0401)	cclA/cilC	456993..457676 (-)	684	WP_003073610.1	prepilin peptidase	Machinery gene
SCIM_RS02290 (SCIM_0402)	-	457827..458354 (+)	528	WP_003078413.1	Dps family protein	-
SCIM_RS02295	-	458617..458841 (+)	225	WP_003073604.1	YqgQ family protein	-
SCIM_RS02300 (SCIM_0403)	-	458835..459215 (+)	381	WP_003078427.1	rhodanese-like domain-containing protein	-

Sequence

Protein

• Length: 351 a.a.
• Molecular weight: 38507.52 Da
• Isoelectric Point: 10.2603

>NTDB_id=51858 SCIM_RS02265 WP_003078259.1 453481..454536(+) (sepM) [Streptococcus intermedius JTH08]
MKKTRNKFKKWPIVFVVGLVLLFISFVVPLPYYIEVPGSAADVRQVLRVDNKEDKEKGSYNFVTVGIQHATFAHLVYAWL
TPFTDIYSAKDLTGGTSDKEYMRINQFYMETSQNLAKYQGLKKAGKDISLKYLGVYVLQVTKNSTFKGILNIADTVTGVN
DKTFSSSKDLIDYVGSQKIGSKVKVNYVEDGQKKSAIGKIIKLENGKNGIGISLIDRTEVTSSIPIEFSTAGIGGPSAGL
MFSLAIYTQIAEPTLRDGRNIAGTGSIDREGKVGDIGGIDKKVVSAAKNGAEIFFAPNNPVTKEAKKANSKAKTNYETAL
ETAKKIKTKMKIVPVKNLQDAIDYLKRTKKS

Nucleotide

• Length: 1056 bp

>NTDB_id=51858 SCIM_RS02265 WP_003078259.1 453481..454536(+) (sepM) [Streptococcus intermedius JTH08]
ATGAAAAAAACAAGAAATAAATTTAAAAAATGGCCGATAGTATTTGTGGTAGGGTTGGTCCTTCTTTTTATCTCTTTTGT
AGTTCCTCTGCCTTATTATATTGAAGTACCAGGTAGTGCAGCAGACGTCCGTCAGGTTTTGCGTGTGGATAACAAAGAAG
ATAAGGAAAAAGGTTCTTACAATTTTGTGACAGTTGGGATTCAGCATGCTACCTTTGCTCATTTAGTTTATGCTTGGCTG
ACCCCTTTTACAGATATTTATTCAGCGAAAGATTTGACTGGCGGAACTTCCGATAAAGAATATATGCGAATCAATCAATT
TTATATGGAAACATCACAAAACTTAGCCAAATATCAAGGGTTAAAAAAAGCAGGAAAGGATATCAGCCTGAAATATTTGG
GCGTCTATGTGTTACAAGTTACCAAAAACTCAACCTTTAAGGGCATTTTAAATATTGCAGATACTGTGACAGGTGTGAAT
GATAAGACTTTTAGTAGTTCAAAAGACTTGATTGATTATGTAGGTTCACAGAAGATTGGTAGTAAGGTAAAAGTAAATTA
TGTTGAAGACGGTCAGAAAAAATCTGCTATAGGTAAAATCATCAAACTTGAAAATGGGAAAAATGGAATTGGTATTAGCT
TGATTGACCGGACAGAGGTTACAAGTAGTATACCGATTGAATTCTCAACTGCGGGAATTGGCGGACCAAGTGCGGGCTTG
ATGTTTAGTTTGGCAATTTATACACAGATTGCTGAACCAACATTAAGAGACGGTAGAAATATTGCTGGTACGGGCTCAAT
TGACCGTGAAGGAAAAGTTGGCGATATTGGAGGCATTGATAAAAAGGTGGTTTCAGCAGCCAAAAATGGTGCAGAAATTT
TCTTTGCACCAAATAATCCAGTCACCAAAGAAGCTAAAAAAGCCAATTCTAAAGCGAAAACAAATTATGAAACAGCTTTG
GAAACTGCTAAAAAAATTAAAACCAAAATGAAAATTGTACCTGTCAAGAACTTGCAAGATGCTATTGATTACCTCAAACG
CACCAAGAAATCTTAA

Domains

Predicted by InterproScan.

• PDZ domain (PDZ_2) (133-195)

• Lon protease (S16) C-terminal proteolytic domain (Lon_C) (235-300)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sepM	Streptococcus mutans UA159	63.188	98.291	0.621