Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   JD965_RS06260 Genome accession   NZ_CP066219
Coordinates   1192974..1193630 (+) Length   218 a.a.
NCBI ID   WP_198698687.1    Uniprot ID   -
Organism   Bacillus siamensis strain B28     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1187974..1198630
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JD965_RS06230 (JD965_06230) - 1188238..1189434 (+) 1197 WP_198698684.1 putative glycoside hydrolase -
  JD965_RS06235 (JD965_06235) - 1189543..1190121 (+) 579 WP_045925331.1 GNAT family N-acetyltransferase -
  JD965_RS06240 (JD965_06240) spx 1190300..1190695 (+) 396 WP_003327578.1 transcriptional regulator Spx -
  JD965_RS06250 (JD965_06250) - 1192042..1192698 (-) 657 WP_198698686.1 TerC family protein -
  JD965_RS06260 (JD965_06260) mecA 1192974..1193630 (+) 657 WP_198698687.1 adaptor protein MecA Regulator
  JD965_RS06265 (JD965_06265) - 1193781..1194941 (+) 1161 WP_198698688.1 competence protein CoiA family protein -
  JD965_RS06270 (JD965_06270) pepF 1195170..1196999 (+) 1830 WP_198698689.1 oligoendopeptidase F Regulator
  JD965_RS06275 (JD965_06275) - 1197034..1197201 (-) 168 WP_016938224.1 hypothetical protein -
  JD965_RS06280 (JD965_06280) spxH 1197486..1198388 (-) 903 WP_198698690.1 protease adaptor protein SpxH -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 25973.81 Da        Isoelectric Point: 4.1345

>NTDB_id=518493 JD965_RS06260 WP_198698687.1 1192974..1193630(+) (mecA) [Bacillus siamensis strain B28]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHDEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPADENLDALLDDFQKEEQAESREDKEQKLQFTLRFDDFEDLISLSKLNLNGIKTTLYSFENR
YYLYADFYEQTDEEVENQLSILLEYAHESPVSIHRLEEYGKLVIADHALYTIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=518493 JD965_RS06260 WP_198698687.1 1192974..1193630(+) (mecA) [Bacillus siamensis strain B28]
ATGGAAATAGAAAGAATTAACGAGCATACTGTAAAATTTTATATGTCTTATGGTGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATCTGGTACAATCGCGAGCGCAGTGAAGAACTGTTCTGGGAAGTCATGGATGAAGTTCATGATGAAGAAGAAT
TCGCTGTCGAGGGTCCTCTTTGGATTCAGGTTCAGGCATTGGACAAAGGACTGGAAATAATCGTAACAAAAGCCCAGCTT
TCCAAGGACGGACAAAAACTCGAACTGCCGATCCCGGAAGATAAAAAACAAGAGCCGGCAGATGAAAATCTCGATGCTTT
ACTTGATGATTTCCAGAAAGAAGAGCAGGCCGAGAGCCGGGAAGATAAGGAGCAAAAGCTTCAGTTCACTTTGCGGTTCG
ATGATTTTGAGGATCTCATCTCGCTATCAAAATTGAATCTTAACGGAATTAAAACGACCCTGTATTCGTTTGAAAACCGA
TATTATTTATATGCAGATTTTTATGAGCAAACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGTTGGAGTACGCGCA
CGAATCGCCAGTCAGCATTCACCGTCTTGAAGAATACGGAAAATTGGTGATCGCTGATCATGCGTTATATACGATAAAAA
AACACTTTGCATCATAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

89.45

100

0.895