Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   JD965_RS06145 Genome accession   NZ_CP066219
Coordinates   1170361..1170552 (+) Length   63 a.a.
NCBI ID   WP_003155061.1    Uniprot ID   A0AAE2TKK9
Organism   Bacillus siamensis strain B28     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1165361..1175552
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JD965_RS06115 (JD965_06115) - 1165690..1165869 (+) 180 WP_016938252.1 YjzC family protein -
  JD965_RS06120 (JD965_06120) - 1166001..1167353 (+) 1353 WP_198697935.1 IS1182 family transposase -
  JD965_RS06125 (JD965_06125) - 1167476..1167661 (-) 186 WP_016938251.1 YjzD family protein -
  JD965_RS06130 (JD965_06130) - 1167923..1168657 (+) 735 WP_049628251.1 hypothetical protein -
  JD965_RS06135 (JD965_06135) - 1168740..1169306 (+) 567 WP_047477784.1 hypothetical protein -
  JD965_RS06140 (JD965_06140) med 1169395..1170348 (+) 954 WP_095240949.1 BMP family ABC transporter substrate-binding protein Regulator
  JD965_RS06145 (JD965_06145) comZ 1170361..1170552 (+) 192 WP_003155061.1 ComZ family protein Regulator
  JD965_RS06150 (JD965_06150) - 1170582..1170824 (-) 243 WP_047477802.1 hypothetical protein -
  JD965_RS06155 (JD965_06155) - 1170991..1171929 (+) 939 WP_047477805.1 beta-ketoacyl-ACP synthase III -
  JD965_RS06160 (JD965_06160) fabF 1171953..1173191 (+) 1239 WP_198698952.1 beta-ketoacyl-ACP synthase II -
  JD965_RS06165 (JD965_06165) - 1173277..1174062 (+) 786 WP_198698678.1 DUF2268 domain-containing protein -
  JD965_RS06170 (JD965_06170) - 1174235..1175221 (+) 987 WP_016938243.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7203.33 Da        Isoelectric Point: 4.2259

>NTDB_id=518490 JD965_RS06145 WP_003155061.1 1170361..1170552(+) (comZ) [Bacillus siamensis strain B28]
MQHEKSLEFMQIAMKYLPEAKAELEKSGIDLSMEMIQPFMDLFTSVMAEAYELGRSDAGELNK

Nucleotide


Download         Length: 192 bp        

>NTDB_id=518490 JD965_RS06145 WP_003155061.1 1170361..1170552(+) (comZ) [Bacillus siamensis strain B28]
ATGCAGCATGAAAAGTCTCTTGAATTTATGCAGATCGCAATGAAATACCTGCCGGAAGCAAAGGCAGAGCTTGAGAAATC
CGGCATTGATCTGTCTATGGAAATGATTCAGCCGTTTATGGATCTATTTACATCGGTCATGGCGGAAGCGTATGAGCTTG
GCAGATCTGATGCCGGAGAGCTGAATAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

86.207

92.063

0.794