Detailed information NTG0518489

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: JD965_RS06140
• Genome accession: NZ_CP066219
• Coordinates: 1169395..1170348 (+)
• Length: 317 a.a.
• NCBI ID: WP_095240949.1
• Uniprot ID: -
• Organism: Bacillus siamensis strain B28
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1164395..1175348

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JD965_RS06110 (JD965_06110)	argF	1164642..1165613 (+)	972	WP_198698677.1	ornithine carbamoyltransferase	-
JD965_RS06115 (JD965_06115)	-	1165690..1165869 (+)	180	WP_016938252.1	YjzC family protein	-
JD965_RS06120 (JD965_06120)	-	1166001..1167353 (+)	1353	WP_198697935.1	IS1182 family transposase	-
JD965_RS06125 (JD965_06125)	-	1167476..1167661 (-)	186	WP_016938251.1	YjzD family protein	-
JD965_RS06130 (JD965_06130)	-	1167923..1168657 (+)	735	WP_049628251.1	hypothetical protein	-
JD965_RS06135 (JD965_06135)	-	1168740..1169306 (+)	567	WP_047477784.1	hypothetical protein	-
JD965_RS06140 (JD965_06140)	med	1169395..1170348 (+)	954	WP_095240949.1	BMP family ABC transporter substrate-binding protein	Regulator
JD965_RS06145 (JD965_06145)	comZ	1170361..1170552 (+)	192	WP_003155061.1	ComZ family protein	Regulator
JD965_RS06150 (JD965_06150)	-	1170582..1170824 (-)	243	WP_047477802.1	hypothetical protein	-
JD965_RS06155 (JD965_06155)	-	1170991..1171929 (+)	939	WP_047477805.1	beta-ketoacyl-ACP synthase III	-
JD965_RS06160 (JD965_06160)	fabF	1171953..1173191 (+)	1239	WP_198698952.1	beta-ketoacyl-ACP synthase II	-
JD965_RS06165 (JD965_06165)	-	1173277..1174062 (+)	786	WP_198698678.1	DUF2268 domain-containing protein	-
JD965_RS06170 (JD965_06170)	-	1174235..1175221 (+)	987	WP_016938243.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35306.96 Da
• Isoelectric Point: 4.7229

>NTDB_id=518489 JD965_RS06140 WP_095240949.1 1169395..1170348(+) (med) [Bacillus siamensis strain B28]
MITRLVMVFSVLLLLSGCAQTPFKGKIEKVGMLFPDTISDLVWGTKGYKGLLAIQSEFNVDVYYKENIRSDEDILKAIDD
LHKKGVNLLYGHGNEYEEIFNMISKDYPDMEFVVANGTAKNDNVTSVHLMGEAMGFFGGMTAAHMSKTNEVGVIASFLWQ
PEVDGFIKGAKYEKPDITVNTEFTDHWDNGNEALHLYKKLKAEGTDVVYPAGDGYNVPVIQQIKKDGLYAIGYVAEQSNL
GKNTVLTSTVQNVDKAYTIIAEQYNNGTLKSGDHNFDFREGVVEMGTFSPLVDKAFQDKISDLVKTYNRTNELPSNE

Nucleotide

• Length: 954 bp

>NTDB_id=518489 JD965_RS06140 WP_095240949.1 1169395..1170348(+) (med) [Bacillus siamensis strain B28]
TTGATCACCAGGCTTGTCATGGTCTTTTCTGTCCTCCTTTTATTGAGCGGATGCGCACAAACTCCGTTTAAAGGGAAAAT
TGAGAAGGTCGGAATGCTTTTTCCCGATACCATCAGTGACCTGGTATGGGGCACAAAAGGTTACAAAGGTTTATTAGCGA
TACAATCTGAATTTAACGTTGACGTTTATTATAAAGAAAATATCAGATCTGATGAAGATATTTTAAAAGCGATAGATGAT
TTGCATAAAAAAGGAGTCAATCTTTTATACGGGCACGGAAATGAATACGAGGAAATCTTCAATATGATCAGTAAGGATTA
TCCCGACATGGAATTCGTCGTCGCAAACGGAACGGCGAAAAACGATAATGTCACAAGCGTTCACCTTATGGGAGAAGCGA
TGGGCTTTTTTGGGGGAATGACGGCCGCCCATATGTCAAAAACCAATGAGGTCGGCGTCATCGCCTCGTTTTTATGGCAG
CCTGAGGTAGACGGCTTTATTAAAGGGGCAAAATATGAAAAGCCCGATATCACCGTCAATACTGAATTTACGGACCATTG
GGATAACGGCAATGAAGCACTGCATCTTTATAAGAAGTTAAAAGCAGAAGGCACGGATGTTGTATATCCGGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATTAAAAAAGACGGGCTTTACGCCATCGGCTATGTCGCCGAGCAATCGAACCTC
GGCAAAAACACGGTGCTGACAAGCACCGTGCAAAATGTAGACAAAGCCTATACAATAATCGCGGAGCAATATAATAACGG
CACGCTCAAGAGCGGAGATCACAACTTCGATTTCAGGGAAGGAGTCGTTGAAATGGGGACGTTCAGCCCTCTGGTTGACA
AAGCATTTCAAGACAAAATCTCAGACCTTGTAAAAACGTATAACCGAACAAATGAACTGCCGTCAAATGAATAG

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	77.918	100	0.779