NTDB

Overview

Name	clpC	Type	Regulator
Locus tag	JC774_RS20255	Genome accession	NZ_CP066179
Coordinates	3894766..3897366 (-)	Length	866 a.a.
NCBI ID	WP_087097969.1	Uniprot ID	-
Organism	Bacillus cytotoxicus strain SM2.8
Function	degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3889766..3902366

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JC774_RS20225 (JC774_20225)	fabF	3890136..3891374 (-)	1239	WP_011983980.1	beta-ketoacyl-ACP synthase II	-
JC774_RS20230 (JC774_20230)	-	3891405..3892337 (-)	933	WP_011983979.1	beta-ketoacyl-ACP synthase III	-
JC774_RS20235 (JC774_20235)	comZ	3892528..3892701 (-)	174	WP_011983978.1	ComZ family protein	Regulator
JC774_RS20240 (JC774_20240)	-	3892761..3893603 (-)	843	WP_011983977.1	NAD(P)-dependent oxidoreductase	-
JC774_RS20245 (JC774_20245)	-	3893662..3894396 (-)	735	WP_011983976.1	hydrolase	-
JC774_RS20250 (JC774_20250)	-	3894553..3894735 (+)	183	WP_011983975.1	YjzD family protein	-
JC774_RS20255 (JC774_20255)	clpC	3894766..3897366 (-)	2601	WP_087097969.1	ATP-dependent chaperone ClpB	Regulator
JC774_RS20260 (JC774_20260)	-	3897535..3897714 (-)	180	WP_041809524.1	YjzC family protein	-
JC774_RS20265 (JC774_20265)	-	3898197..3899006 (+)	810	WP_011983972.1	Cof-type HAD-IIB family hydrolase	-
JC774_RS20270 (JC774_20270)	-	3899107..3899247 (+)	141	WP_011983971.1	hypothetical protein	-
JC774_RS20275 (JC774_20275)	-	3899248..3899445 (+)	198	WP_011983970.1	DUF3813 domain-containing protein	-
JC774_RS20280 (JC774_20280)	-	3899470..3900327 (-)	858	WP_087094607.1	YitT family protein	-
JC774_RS20285 (JC774_20285)	-	3900431..3900562 (+)	132	WP_011983968.1	DUF3941 domain-containing protein	-
JC774_RS20290 (JC774_20290)	prsA	3900688..3901545 (+)	858	WP_011983967.1	peptidylprolyl isomerase PrsA	-

Sequence

Protein

Download Length: 866 a.a. Molecular weight: 97706.00 Da Isoelectric Point: 5.2823

                                >NTDB_id=518172 JC774_RS20255 WP_087097969.1 3894766..3897366(-) (clpC) [Bacillus cytotoxicus strain SM2.8]

MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLLALLKQQDGLAVRIFQKMNVNIEQLTKEVETLIQKKPSVTGSGIE

AGKLYITGALQQLLVKAEAEAKKLQDEYISVEHVLLAFCEETGDVNRLFSNFRITKDTLLQFLMAVRGNQRVTSQNPEVT

YEALEKYGRDLVAEVKQGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEGLKDRTI

FALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEGAMDAGNMLKPMLARGELHCIGATTLD

EYRKYIEKDPALERRFQQVLAEEPTVEDTISILRGLKERFEIYHGVNIHDRALVAASVLSDRYISDRFLPDKAIDLVDEA

CATIRTEIDSMPTELDEVTRRIMQLEIEEAALGKETDRGSQERLKTLQHELSDLKEVASGMRAQWEKEKEEIHKVRNLRE

KLERLRRELEEAEGNYDLNKAAELRHGKIPEVEKELKVAEEAGTHHENENRLLREEVSEEEIANIVSRWTGIPVAKLVEG

EREKLLRLEQILSERVIGQEEAVSLVADAVLRARAGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDM

SEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVI

IMTSNIGSAYLLEGLQENGAIKEEARDLVMGELRGHFRPEFLNRVDEIILFKPLTTHEIKGIVDKIVKELQGRLVERHIT

VALTESAKEFIVESGFDPMYGARPLKRYVQRQIETKLARELIAGTIIDNSHVVVDVENNEFVVHVK

Nucleotide

Download Length: 2601 bp

                                >NTDB_id=518172 JC774_RS20255 WP_087097969.1 3894766..3897366(-) (clpC) [Bacillus cytotoxicus strain SM2.8]

ATGGACTTAAATCAAATGACGACAAAAACACAAGAAGCGATTATGAGTGCCCAATCTTTAGCGGTATCTCATCATCACCA

AGAAGTAGATACTGTTCATCTATTGCTTGCGTTGCTAAAGCAGCAGGATGGATTAGCGGTACGTATTTTTCAAAAAATGA

ATGTGAATATAGAACAATTAACGAAAGAAGTGGAAACGCTTATTCAGAAAAAGCCATCTGTAACAGGAAGTGGGATAGAA

GCTGGGAAACTGTATATTACAGGCGCTTTGCAACAATTGCTCGTTAAGGCAGAAGCGGAAGCGAAAAAACTGCAAGATGA

ATACATTTCAGTAGAACATGTATTATTAGCTTTTTGTGAAGAAACAGGGGATGTAAATCGTCTATTTTCTAATTTCCGTA

TTACAAAGGATACATTACTACAGTTTTTAATGGCAGTTCGGGGGAATCAAAGAGTGACAAGTCAAAATCCAGAAGTAACA

TATGAAGCGTTAGAGAAATATGGCCGTGATTTGGTCGCAGAAGTGAAACAAGGAAAAATTGACCCTGTAATTGGACGCGA

TAGTGAGATTCGCCGCGTCATTCGCATTCTTTCGCGTAAAACAAAAAATAACCCTGTGTTAATTGGTGAACCTGGTGTGG

GGAAAACAGCCATTGTGGAAGGATTAGCGCAGCGAATTGTAAAAAAAGATGTACCGGAAGGATTAAAAGATCGCACCATC

TTTGCGTTAGATATGAGCGCCCTTGTAGCTGGAGCAAAATTCCGCGGGGAGTTTGAAGAACGTTTACAAGCTGTATTAAA

TGAAATTAAAAAGAGTGAAGGACGTATTCTGTTATTCATTGATGAACTGCATACAATTGTAGGAGCTGGGAAAACAGAAG

GAGCAATGGATGCTGGGAATATGTTGAAACCGATGCTTGCGCGCGGTGAGCTTCATTGTATCGGTGCGACAACTTTAGAT

GAGTACCGAAAATATATTGAAAAAGATCCGGCGTTAGAACGTCGTTTTCAACAAGTATTAGCGGAAGAGCCAACGGTGGA

AGATACGATTTCTATTTTACGTGGTCTCAAAGAGCGTTTTGAAATTTATCATGGTGTAAATATCCATGACCGTGCGCTTG

TAGCAGCTTCTGTATTATCTGATCGCTATATCTCTGATCGTTTTTTACCGGATAAAGCAATTGATCTTGTTGATGAGGCA

TGCGCTACCATTCGGACAGAAATTGATTCTATGCCAACAGAATTAGATGAAGTAACGCGCCGCATTATGCAGTTAGAAAT

TGAAGAAGCGGCGCTTGGAAAAGAAACGGATCGCGGTAGTCAAGAAAGGTTGAAAACATTACAGCACGAGTTATCTGATT

TAAAAGAAGTGGCAAGTGGCATGCGTGCGCAGTGGGAAAAAGAAAAAGAAGAAATTCATAAAGTACGCAACTTGCGCGAG

AAATTAGAGCGTTTGCGCCGTGAACTGGAAGAAGCAGAAGGAAACTATGATTTAAATAAAGCGGCTGAACTTCGTCACGG

TAAAATTCCAGAGGTAGAAAAAGAATTAAAAGTAGCAGAAGAAGCCGGAACACATCATGAAAACGAGAACCGTTTGCTTC

GTGAAGAAGTAAGTGAAGAAGAAATCGCAAATATTGTTTCGCGCTGGACAGGAATTCCAGTAGCGAAATTAGTAGAAGGA

GAACGTGAAAAGTTACTGCGATTAGAGCAAATTTTATCAGAGCGTGTAATTGGTCAAGAAGAAGCAGTAAGTCTTGTAGC

AGATGCAGTTCTTCGTGCGAGAGCAGGAATTAAAGACCCGAATCGCCCGATTGGTTCTTTCATTTTCTTAGGACCGACAG

GGGTTGGGAAAACTGAACTTGCGAAAACATTAGCACAGTCGTTATTTGATAGCGAAGAACAAATGATCCGGATAGATATG

TCTGAGTATATGGAAAAACATGCGGTATCCCGTTTAATTGGAGCGCCTCCAGGATATGTAGGATATGAGGAAGGCGGACA

ATTAACAGAAGCGGTTCGTCGCAAACCATATTCCGTTATTTTATTGGATGAGATTGAAAAAGCACATCCGGAAGTGTTTA

ATATTTTATTACAAATGTTAGATGATGGTCGCATTACCGATTCACAAGGACGAACAGTCGACTTTAAAAATACAGTAATT

ATTATGACATCAAATATTGGATCCGCATATTTATTAGAAGGATTACAAGAGAATGGCGCTATAAAAGAGGAAGCAAGAGA

CCTTGTAATGGGGGAACTTAGAGGACATTTTCGTCCTGAGTTTTTAAACCGTGTAGATGAAATTATTTTATTTAAACCAC

TTACAACTCATGAAATAAAAGGAATTGTTGATAAGATTGTAAAAGAATTACAAGGACGTTTAGTGGAGCGTCATATTACA

GTTGCATTAACAGAATCCGCAAAAGAATTTATTGTAGAATCTGGGTTTGACCCTATGTATGGTGCACGTCCGTTAAAAAG

ATATGTGCAGCGCCAAATTGAAACGAAACTTGCAAGAGAATTAATTGCAGGAACAATAATAGATAATAGCCATGTAGTAG

TAGATGTAGAAAATAATGAATTCGTTGTGCATGTGAAATAA