Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   JC774_RS20235 Genome accession   NZ_CP066179
Coordinates   3892528..3892701 (-) Length   57 a.a.
NCBI ID   WP_011983978.1    Uniprot ID   A7GM66
Organism   Bacillus cytotoxicus strain SM2.8     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 3887528..3897701
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JC774_RS20215 (JC774_20215) - 3888355..3889101 (-) 747 WP_011983982.1 YjbA family protein -
  JC774_RS20220 (JC774_20220) - 3889242..3890030 (-) 789 WP_011983981.1 DUF2268 domain-containing protein -
  JC774_RS20225 (JC774_20225) fabF 3890136..3891374 (-) 1239 WP_011983980.1 beta-ketoacyl-ACP synthase II -
  JC774_RS20230 (JC774_20230) - 3891405..3892337 (-) 933 WP_011983979.1 beta-ketoacyl-ACP synthase III -
  JC774_RS20235 (JC774_20235) comZ 3892528..3892701 (-) 174 WP_011983978.1 ComZ family protein Regulator
  JC774_RS20240 (JC774_20240) - 3892761..3893603 (-) 843 WP_011983977.1 NAD(P)-dependent oxidoreductase -
  JC774_RS20245 (JC774_20245) - 3893662..3894396 (-) 735 WP_011983976.1 hydrolase -
  JC774_RS20250 (JC774_20250) - 3894553..3894735 (+) 183 WP_011983975.1 YjzD family protein -
  JC774_RS20255 (JC774_20255) clpC 3894766..3897366 (-) 2601 WP_087097969.1 ATP-dependent chaperone ClpB Regulator

Sequence

Protein


Download         Length: 57 a.a.        Molecular weight: 6553.74 Da        Isoelectric Point: 4.6653

>NTDB_id=518171 JC774_RS20235 WP_011983978.1 3892528..3892701(-) (comZ) [Bacillus cytotoxicus strain SM2.8]
MNEKNMQFLQIAMKYLPEAKAILDDHGVALDMEKAQPVLELLMKVMNEAYELGKTEK

Nucleotide


Download         Length: 174 bp        

>NTDB_id=518171 JC774_RS20235 WP_011983978.1 3892528..3892701(-) (comZ) [Bacillus cytotoxicus strain SM2.8]
ATGAATGAAAAAAATATGCAGTTTTTACAAATCGCAATGAAATATTTACCAGAGGCAAAAGCAATTTTAGATGATCATGG
AGTGGCACTTGATATGGAGAAAGCCCAGCCGGTATTAGAATTGTTAATGAAAGTGATGAATGAAGCATATGAACTAGGCA
AGACAGAAAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-56)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A7GM66

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

58.182

96.491

0.561