Detailed information NTG0517942

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: I6N98_RS11590
• Genome accession: NZ_CP066167
• Coordinates: 2526692..2528047 (+)
• Length: 451 a.a.
• NCBI ID: WP_198568523.1
• Uniprot ID: A0A7T4QYD7
• Organism: Spongiibacter nanhainus strain csc3.9
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 2521692..2533047

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6N98_RS11575 (I6N98_11575)	-	2522314..2523180 (+)	867	WP_198568520.1	outer membrane protein assembly factor BamD	-
I6N98_RS11580 (I6N98_11580)	-	2523278..2524906 (-)	1629	WP_198568521.1	NAD+ synthase	-
I6N98_RS11585 (I6N98_11585)	-	2525140..2526681 (+)	1542	WP_198568522.1	sensor histidine kinase	-
I6N98_RS11590 (I6N98_11590)	pilR	2526692..2528047 (+)	1356	WP_198568523.1	sigma-54-dependent transcriptional regulator	Regulator
I6N98_RS11595 (I6N98_11595)	-	2528075..2531902 (-)	3828	WP_198568524.1	pilus assembly protein	-
I6N98_RS11600 (I6N98_11600)	-	2531943..2532443 (-)	501	WP_198568525.1	hypothetical protein	-

Sequence

Protein

• Length: 451 a.a.
• Molecular weight: 49923.85 Da
• Isoelectric Point: 5.2591

>NTDB_id=517942 I6N98_RS11590 WP_198568523.1 2526692..2528047(+) (pilR) [Spongiibacter nanhainus strain csc3.9]
MNTNTVLIVDDEPDIRELLDITLTRMGLNTLSVGSVQEALDALAEQPHIQLCLTDIRLPDGSGIDIVKHIQRSYDTVATA
VLTAYGSTELAVEALKAGAFDFINKPVSVEQLRNLVKSALRLESESRIDSSQHSRLLGETPGIIKLREQIKKLARSQAPV
YISGESGSGKEVVARLIHANGPRANAAFVPVNCGAIPSELVESEFFGHIKGSFTGAFEDKEGLFEAANGGTLFLDEVADL
PLNMQVKLLRAIQEKAVRRVGSNREIPVDVRILSATHRDLAKEVAAEHFRSDLYYRINVIEIQVPSLRERAQDIPLLADF
ILQKIAKDWSVAKPTLSPDALDALRSYPFPGNVRELENIIERAATLCENDCITPRDLSLPTHTPSDHNTAANVDHLTAAR
GQFENYIENIEKAVMLAALEETQWKKTEAANVLGLTFRQFRYKLKKYQLDE

Nucleotide

• Length: 1356 bp

>NTDB_id=517942 I6N98_RS11590 WP_198568523.1 2526692..2528047(+) (pilR) [Spongiibacter nanhainus strain csc3.9]
ATGAATACCAACACCGTACTCATTGTCGATGACGAGCCCGATATCCGCGAGCTACTGGATATCACCCTAACCCGCATGGG
GCTCAATACGCTGTCAGTCGGGTCGGTTCAGGAAGCCTTGGACGCTTTGGCAGAACAACCCCATATTCAGCTTTGCCTGA
CTGATATCCGACTGCCAGACGGCTCCGGTATCGATATCGTCAAGCATATACAGCGCAGCTACGACACTGTTGCCACTGCG
GTATTAACGGCCTATGGCAGTACAGAGCTTGCTGTCGAGGCGCTCAAAGCCGGGGCCTTTGATTTCATCAACAAGCCGGT
TTCGGTAGAACAGCTTCGCAACCTGGTTAAATCCGCGCTGCGCCTGGAGAGCGAAAGCCGCATCGATAGCAGCCAACATT
CGCGGCTGCTGGGCGAAACACCCGGCATCATCAAGCTCAGAGAGCAGATTAAAAAACTGGCGCGCAGCCAGGCGCCGGTC
TATATCAGCGGTGAGTCCGGCAGCGGTAAAGAGGTGGTGGCGCGCCTGATCCACGCCAACGGCCCGAGAGCCAACGCCGC
CTTTGTGCCGGTGAACTGCGGCGCTATACCCAGTGAGCTGGTAGAGAGCGAATTTTTTGGTCACATCAAAGGCAGCTTCA
CTGGCGCCTTTGAAGACAAAGAAGGCCTGTTTGAGGCCGCCAATGGTGGCACCCTTTTCCTGGATGAAGTCGCCGATCTG
CCACTAAACATGCAAGTCAAACTGCTGCGGGCCATTCAGGAGAAAGCGGTGCGCCGGGTGGGATCAAACCGGGAGATTCC
CGTGGATGTACGGATTCTCAGTGCTACTCACCGCGACCTGGCCAAGGAAGTCGCCGCAGAACATTTTCGCAGCGACTTGT
ACTACCGTATCAACGTGATTGAGATACAGGTCCCTAGTCTGAGGGAGCGCGCCCAGGATATCCCCCTGCTGGCAGACTTT
ATCCTGCAGAAGATTGCTAAAGACTGGTCAGTGGCCAAACCCACTTTAAGCCCAGACGCTCTGGATGCATTGCGCAGCTA
TCCCTTCCCCGGCAATGTTCGGGAACTGGAAAATATTATCGAGCGCGCGGCTACGTTGTGCGAAAACGATTGCATCACGC
CGCGAGATCTCAGCCTGCCAACCCACACGCCTTCCGATCACAATACCGCGGCCAATGTCGATCACCTTACTGCCGCCAGA
GGCCAGTTTGAGAATTACATCGAGAATATAGAGAAAGCTGTTATGTTGGCAGCTCTGGAGGAAACCCAATGGAAGAAAAC
CGAAGCAGCCAACGTGCTAGGCCTGACCTTCAGACAATTTCGCTATAAGTTGAAGAAGTATCAGCTGGACGAATAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (6-116)

• Bacterial regulatory protein, Fis family (HTH_8) (407-447)

• Sigma-54 interaction domain (Sigma54_activat) (137-303)

3D structure

• AlphaFold DB: A0A7T4QYD7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	60.889	99.778	0.608
pilR	Acinetobacter baumannii strain A118	48.913	100	0.499