Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   I6N98_RS01135 Genome accession   NZ_CP066167
Coordinates   227499..227891 (+) Length   130 a.a.
NCBI ID   WP_198569999.1    Uniprot ID   A0A7T4R159
Organism   Spongiibacter nanhainus strain csc3.9     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 222499..232891
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6N98_RS01105 (I6N98_01105) - 223154..223453 (-) 300 WP_198569993.1 c-type cytochrome -
  I6N98_RS01110 (I6N98_01110) yihA 223616..224269 (+) 654 WP_198569994.1 ribosome biogenesis GTP-binding protein YihA/YsxC -
  I6N98_RS01115 (I6N98_01115) ruvX 224266..224685 (-) 420 WP_198569995.1 Holliday junction resolvase RuvX -
  I6N98_RS01120 (I6N98_01120) - 224691..225257 (-) 567 WP_198569996.1 YqgE/AlgH family protein -
  I6N98_RS01125 (I6N98_01125) - 225378..226262 (-) 885 WP_198569997.1 energy transducer TonB family protein -
  I6N98_RS01130 (I6N98_01130) gshB 226273..227226 (-) 954 WP_198569998.1 glutathione synthase -
  I6N98_RS01135 (I6N98_01135) pilG 227499..227891 (+) 393 WP_198569999.1 twitching motility response regulator PilG Regulator
  I6N98_RS01140 (I6N98_01140) pilH 228071..228433 (+) 363 WP_198570000.1 twitching motility response regulator PilH -
  I6N98_RS01145 (I6N98_01145) - 228445..228987 (+) 543 WP_198570001.1 chemotaxis protein CheW -
  I6N98_RS01150 (I6N98_01150) - 229081..231102 (+) 2022 WP_198570002.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 130 a.a.        Molecular weight: 14383.69 Da        Isoelectric Point: 6.4625

>NTDB_id=517926 I6N98_RS01135 WP_198569999.1 227499..227891(+) (pilG) [Spongiibacter nanhainus strain csc3.9]
MEVNFSDLKVMVIDDSKTIRRTTETLLAKEGCTVITAIDGFDALAKIADSKPDIIFVDIMMPRLDGYQTCALIKNNSEFK
KTPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKHELLEAIQTHVTSSPA

Nucleotide


Download         Length: 393 bp        

>NTDB_id=517926 I6N98_RS01135 WP_198569999.1 227499..227891(+) (pilG) [Spongiibacter nanhainus strain csc3.9]
ATGGAAGTCAATTTTTCAGATTTGAAGGTCATGGTCATCGATGACAGCAAGACGATTCGGCGCACCACCGAAACGCTGTT
GGCCAAAGAAGGCTGCACGGTGATCACGGCGATCGACGGTTTTGATGCGCTGGCAAAGATTGCCGACAGCAAGCCCGATA
TTATTTTTGTCGACATCATGATGCCGCGTTTGGATGGTTATCAGACCTGTGCATTGATCAAGAATAATAGCGAGTTTAAA
AAGACACCGGTGATTATGTTGTCCAGCAAGGACGGCTTGTTCGACAAGGCCAAAGGCCGTATCGTTGGGTCGGACCAGTA
TCTAACCAAGCCTTTCAGCAAACACGAATTGCTGGAGGCTATTCAAACCCACGTAACCAGCTCGCCAGCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7T4R159

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76.378

97.692

0.746
  vicR Streptococcus mutans UA159

43.333

92.308

0.4