Detailed information NTG0051769

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: A458_RS35730
• Genome accession: NC_018028
• Coordinates: 3043607..3045832 (-)
• Length: 741 a.a.
• NCBI ID: WP_080583069.1
• Uniprot ID: -
• Organism: Stutzerimonas stutzeri CCUG 29243
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3038607..3050832

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A458_RS35695 (A458_13915)	murB	3039000..3040019 (-)	1020	WP_014820903.1	UDP-N-acetylmuramate dehydrogenase	-
A458_RS35700 (A458_13920)	-	3040016..3040480 (-)	465	WP_014820904.1	low molecular weight protein-tyrosine-phosphatase	-
A458_RS35705 (A458_13925)	kdsB	3040482..3041246 (-)	765	WP_014820905.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
A458_RS35710 (A458_13930)	-	3041243..3041428 (-)	186	WP_003299639.1	Trm112 family protein	-
A458_RS35715 (A458_13935)	lpxK	3041474..3042478 (-)	1005	WP_014820906.1	tetraacyldisaccharide 4'-kinase	-
A458_RS35720 (A458_13940)	-	3042478..3042906 (-)	429	WP_014820907.1	ExbD/TolR family protein	-
A458_RS35725 (A458_13945)	-	3042903..3043535 (-)	633	WP_003299642.1	MotA/TolQ/ExbB proton channel family protein	-
A458_RS35730 (A458_13950)	comA	3043607..3045832 (-)	2226	WP_080583069.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
A458_RS35735 (A458_13955)	-	3045983..3046498 (+)	516	WP_003299644.1	DUF2062 domain-containing protein	-
A458_RS35740 (A458_13960)	-	3046505..3047749 (-)	1245	WP_003299645.1	lipoprotein-releasing ABC transporter permease subunit	-
A458_RS35745 (A458_13965)	lolD	3047749..3048447 (-)	699	WP_014820909.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
A458_RS35750 (A458_13970)	-	3048455..3049702 (-)	1248	WP_014820910.1	lipoprotein-releasing ABC transporter permease subunit	-
A458_RS35755 (A458_13975)	-	3049738..3050373 (+)	636	WP_014820911.1	PilZ domain-containing protein	-
A458_RS35760 (A458_13980)	-	3050377..3050685 (+)	309	WP_014820912.1	hypothetical protein	-

Sequence

Protein

• Length: 741 a.a.
• Molecular weight: 80938.35 Da
• Isoelectric Point: 9.9978

>NTDB_id=51769 A458_RS35730 WP_080583069.1 3043607..3045832(-) (comA) [Stutzerimonas stutzeri CCUG 29243]
MRTWMLALAAGLVLPRFLPALPSFWILCVLGVLGGLLLSRRRWASSGLLLLGFAWACWQCQSAIDDRLPVSQDGRTYWIQ
GTVSGLPTSTGDVVRFELEDIESRHAGLPSKVRLSWYGGPQVRAGERWRLAARLKRPRGLVNPHAFDYEAWLLARRIGAT
GSVKAGERLFAPHSVNSWRDRLRLRLMEVSASGRQGAVAALVVGDDSGLSREDWQVLQDTGTVHLMVISGQHIGMLAGLL
YGLVALAARWGFWPSRWPWLPCACALALAGALSYGWLAGFDVPVRRACLMVAVALLWRLRFRHLGVWQPLLLALNGVLLV
DPLVSLQPGFWLSFGAVAVLALAFSGRLGRWKWWATLTRAQWAASLGLLPLLLTLGLPVSASGPLANLIAVPWVSLTVPF
ALLGTLLLPLGGIGEALLWLVGTSLALLFELLSAMATWQPAWLAVGIPIWALLMIGLGVLLMLLPSGVPVRALGLVLLAP
LVYPPYSEVAEGRARVSVLDVGQGLSVLVRTREHALLYDAGPRQGDFDTGERVVFPSLRSLGVKRLDILLLSHADNDHSG
GAQAIRRLLPVARTVSGEPQRHATDLNAKPCENGAEWRWNGVRFSLWQWQAARESNQTSCVLLVEANGERVLLTGDIDQA
AEQALLLSGQDVKAQWLLLPHHGSRSSSSEPFLRAVEPSAALISRSLHNAFGHPHPTVTARLEASAIDVYDTALHGAIRI
DLGDFSVAEIQRAERRFWREK

Nucleotide

• Length: 2226 bp

>NTDB_id=51769 A458_RS35730 WP_080583069.1 3043607..3045832(-) (comA) [Stutzerimonas stutzeri CCUG 29243]
ATGCGCACATGGATGTTGGCGCTCGCGGCAGGCCTCGTCTTGCCCCGTTTCTTACCGGCGTTGCCCTCTTTCTGGATTTT
GTGCGTGCTTGGCGTGCTGGGGGGCTTGCTGCTTTCGCGTCGGCGCTGGGCGTCGTCCGGGTTGCTTCTCCTCGGGTTCG
CCTGGGCATGCTGGCAGTGCCAGAGTGCCATTGATGATCGCCTGCCCGTTTCGCAAGATGGCCGGACATACTGGATCCAG
GGGACGGTCAGTGGATTGCCCACCAGCACGGGCGATGTCGTGCGCTTCGAGTTGGAGGATATCGAGTCGAGGCATGCTGG
GCTGCCGTCGAAGGTGCGTCTGTCCTGGTACGGCGGCCCGCAAGTGCGGGCCGGCGAGCGCTGGCGGCTTGCGGCTCGAC
TGAAACGTCCGCGTGGCCTGGTCAATCCGCATGCGTTCGACTACGAAGCCTGGTTGCTGGCTCGTCGCATTGGCGCGACC
GGTTCGGTCAAGGCGGGAGAGCGCCTCTTCGCGCCGCACTCCGTGAATAGTTGGCGCGACCGCTTGAGGCTCCGTCTGAT
GGAGGTCTCCGCGTCCGGTCGACAAGGCGCGGTCGCGGCACTGGTGGTCGGTGATGACTCCGGCCTGAGTCGTGAGGATT
GGCAGGTGTTGCAGGACACCGGCACGGTGCACCTGATGGTCATATCCGGACAGCACATCGGCATGCTGGCTGGCTTGCTA
TACGGACTGGTTGCGCTGGCAGCTCGATGGGGCTTCTGGCCCAGCCGTTGGCCCTGGCTTCCATGCGCATGCGCGTTGGC
TCTCGCGGGTGCGCTTTCCTATGGATGGCTCGCGGGGTTCGATGTGCCGGTGCGTCGTGCGTGTCTCATGGTCGCCGTGG
CCCTGCTCTGGCGCTTGCGCTTTCGTCATCTGGGTGTCTGGCAGCCGCTGTTGCTGGCGCTGAATGGTGTCCTGCTGGTC
GATCCCCTGGTCTCGTTGCAGCCGGGGTTTTGGCTCTCATTCGGGGCCGTTGCGGTGCTCGCGCTGGCGTTCTCCGGTCG
GCTCGGCCGATGGAAGTGGTGGGCGACGCTGACGCGCGCCCAATGGGCAGCTTCCCTCGGCCTGCTGCCTCTGTTACTGA
CGCTGGGACTGCCGGTCAGCGCCAGCGGGCCTTTGGCCAATCTGATTGCCGTACCCTGGGTTAGCCTCACCGTTCCCTTC
GCGCTGCTCGGCACTTTGCTTCTGCCGTTGGGTGGTATCGGCGAGGCGCTACTCTGGTTGGTCGGCACCTCGCTGGCGCT
GCTGTTCGAGCTGCTGTCCGCGATGGCTACCTGGCAACCCGCCTGGCTGGCGGTCGGTATACCCATCTGGGCCTTGCTGA
TGATTGGGCTGGGTGTGCTGTTGATGTTATTGCCGTCAGGTGTGCCGGTGCGTGCGCTCGGACTGGTGCTCCTGGCGCCG
TTGGTGTATCCCCCGTATTCCGAAGTAGCCGAAGGACGGGCGCGGGTCTCGGTGCTGGATGTGGGGCAGGGGCTTTCGGT
ACTGGTGCGGACCCGGGAGCACGCGTTGCTCTACGATGCGGGACCGAGACAGGGTGATTTCGATACCGGCGAGCGTGTCG
TGTTCCCGTCGCTGCGAAGCCTGGGCGTGAAGAGGCTGGACATACTGCTGCTGAGTCATGCGGATAACGATCATTCCGGT
GGCGCCCAGGCGATCCGTCGACTGCTTCCGGTCGCGCGGACCGTCAGTGGGGAGCCGCAACGACATGCGACCGATCTGAA
TGCCAAGCCCTGTGAAAACGGTGCCGAGTGGCGGTGGAATGGCGTGCGTTTCAGTCTCTGGCAATGGCAGGCGGCCCGGG
AAAGCAATCAGACGTCATGCGTTCTGCTGGTCGAGGCCAATGGCGAACGGGTTCTGCTTACCGGCGATATCGATCAGGCC
GCTGAGCAGGCGTTGCTGCTCAGCGGACAGGACGTAAAGGCGCAGTGGTTGCTATTGCCTCATCACGGCAGCCGCAGCTC
ATCGTCGGAGCCATTCCTGCGAGCGGTGGAACCGAGCGCCGCGCTGATCTCGCGCAGCCTGCACAACGCTTTCGGTCATC
CTCATCCGACTGTGACCGCTCGCCTCGAAGCGTCCGCAATCGACGTTTACGACACCGCTTTGCACGGCGCGATCCGCATC
GATCTCGGCGATTTCTCGGTGGCGGAGATACAGCGTGCGGAACGTCGGTTCTGGCGGGAAAAATGA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (23-168)

• Competence protein (Competence) (201-464)

• Metallo-beta-lactamase superfamily (Lactamase_B) (500-683)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	66.482	97.436	0.648
comA	Ralstonia pseudosolanacearum GMI1000	36.494	100	0.379