Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   JC624_RS03310 Genome accession   NZ_CP066124
Coordinates   670808..675337 (+) Length   1509 a.a.
NCBI ID   WP_227062757.1    Uniprot ID   -
Organism   Acinetobacter pittii strain 32292     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 665808..680337
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JC624_RS03285 - 666247..666885 (-) 639 WP_213033966.1 hypothetical protein -
  JC624_RS03290 pilG 667170..667553 (+) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  JC624_RS03295 pilH 667577..667939 (+) 363 WP_046811934.1 response regulator -
  JC624_RS03300 pilI 667996..668532 (+) 537 WP_046811935.1 chemotaxis protein CheW -
  JC624_RS03305 - 668579..670660 (+) 2082 WP_227062755.1 methyl-accepting chemotaxis protein -
  JC624_RS03310 chpA 670808..675337 (+) 4530 WP_227062757.1 Hpt domain-containing protein Regulator
  JC624_RS03315 - 675334..675801 (+) 468 WP_068565021.1 hypothetical protein -
  JC624_RS03320 - 676105..676986 (+) 882 WP_068565024.1 alpha/beta fold hydrolase -
  JC624_RS03325 dapE 677122..678258 (-) 1137 WP_005064372.1 succinyl-diaminopimelate desuccinylase -
  JC624_RS03330 - 678385..678528 (-) 144 WP_014207555.1 entericidin A/B family lipoprotein -
  JC624_RS03335 - 678652..679533 (-) 882 WP_227062759.1 DUF1853 family protein -
  JC624_RS03340 - 679637..680005 (+) 369 WP_017400240.1 YbaN family protein -

Sequence


Protein


Download         Length: 1509 a.a.        Molecular weight: 172177.89 Da        Isoelectric Point: 4.3296

>NTDB_id=517573 JC624_RS03310 WP_227062757.1 670808..675337(+) (chpA) [Acinetobacter pittii strain 32292]
MKEILKTLTEAMMLPEDSYSEQDAEFLEIFVEEIEEIFVDLQPLLNEWMRSENIATLTEIRRHFHTLKGSGRMIGAKSSA
ELAWTVEDTLNRVINQSLKLTPAIQSYVQLVFKFYFLKLVDNFKQKRAHAVDLRPLILLGQQLQQQQSLEPALEELLQLS
NTLTAETITGLELDYLEQDSLAESIVEDVHTEIEINLNETLALFMEEAEEHLSTINQFLNQELHQYDSYNALIRALHTLR
GSSAMAQVETIFEASTKVEQLFKILLQEELSSNSDEILLLQEYRDFIGESLELLSSNSSSEQLEVRLEQFNQSWDVYVEQ
HSDRTDPLMPSHGLVSQLLLLDVSELLDAELDFEKGIRNEFPGYLERLSEQADLLLQHTHSQAMLGLHEYTSQLKDSYNV
LLDKPVLLQSDYIFEIYQKAHQQLIQLFDALAAGQRVGIVKQHQSILEELKLYTLHTPSIQNDLSQQNFTFDESLFNIEL
ESEVPEVIRVENSSDSADWTLLSQSVQQDRQYISSTQVNQNFDPDLLDIFLEEADELLEGMDTDLNIWINDQENFAALNN
LMRYLHTLKGGANMIQATYIGLIAHELESIYERLIQRQLIASSALIDFIRLVQDDLADRLQIMREKQLDYEAYYTINALK
RAGQNSNFQSAPEIEASDIEREIFSEQEVISEVLIDEVPAEIETVIEELEAHHDQVFDTVVTELAAPVEAITSVVSSQEN
DALVDEEDITAVVEQTFLEEAAELLEMADMLLKQWFDQRTNRSILLQLQRAVHSLKGGARMVGLEAVYAIAYQLENAFEQ
FALHHFNSNIYDHLLESAIAWLKDAIFKYNYQHFDGLQQSLENIQFFETNIQIPAKLSKADLFSSEPVMTFIQGDGTEPP
PMMGAWEQTQRLDQNNEMIRVSADLIEKMIDLSGENSINRSRIEMDLSQFGHTLAEMELAIQRLADQLRRMEGELETQII
AKHGIEHSRYTEFDPLEMDRYSSLNQLSKSLAESASDLVDFKNTLSDKIRDTESLLLQQSRIQAEIQEGLMRTRLVPFSR
LLPRLQRIVRQTSTALNRPAELFVNNTEGELDRNILERLVTPLEHMLRNAIDHGLEDRVQRQQAQKPETGRIELNIHRQG
TDVVVTFKDDGRGIDIEKVRQKALMFGLINPEQVLEHQDILQLIFHPGLSTADQVTQISGRGVGLDVVQSDIKALGGHVS
VDSVYGQGTVFTIRVPTTVAVSDALMVKVADQQFAIPLAQIDRIVRVSPASLEQYFGSVQEFFEFENKRYPLRYLSEFVG
SQPIPRLSGMMYSLPVLMIKANNGQTVALLVDQLIGSRAQIVVKPIGQQFSSIGAIAGATILGDGQVCLILDGQNIARQI
QSTRRLKLVNEAVYRQREPDERRLIMIVDDSVTVRKVTSRLLERQGYDVVTAKDGVDAIEQLENIKPDLMLLDIEMPRMD
GFEVLNLVRHHDMHQYMPIIMITSRTGEKHRERAFSLGVSQYMGKPFQEEELLENIDTLLVAFESEVKS

Nucleotide


Download         Length: 4530 bp        

>NTDB_id=517573 JC624_RS03310 WP_227062757.1 670808..675337(+) (chpA) [Acinetobacter pittii strain 32292]
ATGAAAGAAATATTAAAAACTTTAACTGAAGCAATGATGCTACCTGAAGATAGCTATTCTGAACAAGATGCTGAGTTTCT
TGAGATTTTCGTCGAAGAAATTGAAGAAATTTTTGTTGATTTGCAACCATTGCTAAATGAATGGATGCGGTCTGAGAATA
TTGCTACGCTCACTGAAATTCGCCGCCATTTCCATACCTTAAAAGGTTCTGGGAGAATGATTGGTGCTAAATCTTCAGCT
GAGCTTGCTTGGACAGTTGAAGACACGCTCAATCGAGTAATCAATCAAAGCCTTAAGTTGACTCCAGCTATCCAGAGTTA
TGTTCAGTTAGTGTTTAAGTTCTATTTCCTTAAATTAGTAGATAACTTTAAGCAAAAAAGAGCACATGCAGTAGATTTAA
GACCGCTTATTTTATTGGGACAACAATTACAACAACAGCAAAGTTTAGAACCTGCTTTAGAAGAGCTTTTACAACTTTCA
AATACGCTTACTGCCGAAACAATAACTGGACTTGAGCTAGACTATCTTGAGCAAGATTCATTGGCTGAGTCAATTGTTGA
AGATGTACATACTGAAATTGAAATAAATCTAAATGAAACCTTAGCCTTATTTATGGAAGAGGCGGAGGAGCATTTATCGA
CAATTAATCAGTTCTTAAATCAAGAGCTACATCAGTATGATAGTTACAATGCTTTAATACGCGCTCTACATACTTTGCGT
GGCAGTTCTGCAATGGCGCAGGTCGAAACAATTTTTGAAGCCAGTACCAAAGTTGAGCAGTTATTTAAAATCTTATTACA
AGAAGAACTTTCTTCTAATTCAGATGAGATTTTATTATTACAAGAATATCGCGATTTTATTGGAGAGAGCTTAGAACTGC
TATCTAGCAATAGTTCAAGTGAACAGCTTGAAGTGAGATTAGAGCAGTTTAATCAATCATGGGATGTCTACGTTGAGCAG
CATAGTGATCGAACAGATCCATTAATGCCTTCACATGGTTTGGTATCGCAATTATTACTGTTAGATGTTTCTGAGCTACT
CGATGCAGAATTAGATTTTGAGAAAGGAATTCGTAACGAGTTTCCTGGTTATCTTGAACGTCTAAGTGAACAGGCTGATT
TGTTGCTACAGCATACCCACTCTCAAGCAATGCTAGGTTTACATGAATATACGAGCCAATTGAAAGACAGCTATAATGTA
TTGCTTGATAAACCTGTGTTATTGCAATCGGACTATATTTTTGAAATTTATCAAAAAGCGCATCAACAACTTATTCAATT
GTTCGATGCTTTAGCTGCTGGTCAGCGAGTCGGTATTGTTAAGCAACATCAAAGTATTCTAGAAGAATTAAAACTTTATA
CGCTACATACACCTAGTATTCAAAATGATTTATCTCAGCAGAATTTTACTTTTGATGAGTCACTATTCAATATTGAACTA
GAGTCTGAAGTTCCAGAAGTTATTAGAGTAGAGAATTCATCAGACTCTGCTGACTGGACCCTATTAAGCCAAAGTGTACA
GCAAGATCGTCAATATATTTCCTCTACACAGGTAAATCAAAACTTTGATCCAGATCTATTAGACATTTTCCTCGAAGAAG
CTGATGAGTTGCTTGAAGGAATGGATACAGATCTTAATATTTGGATTAATGATCAAGAGAACTTTGCGGCTCTCAATAAT
TTGATGCGTTATTTGCATACCTTAAAAGGTGGAGCAAATATGATCCAAGCAACTTATATTGGCTTAATTGCACATGAATT
GGAAAGTATTTATGAGCGATTAATTCAAAGACAGCTAATTGCTTCATCTGCTCTCATTGATTTTATACGTCTGGTTCAAG
ATGACTTGGCTGACCGTCTACAAATCATGCGTGAAAAACAGCTAGATTATGAAGCTTATTACACAATTAACGCATTGAAA
AGAGCAGGTCAAAACTCTAACTTCCAATCTGCACCTGAGATTGAAGCATCTGATATTGAACGTGAGATATTCTCTGAACA
AGAGGTGATATCTGAAGTATTAATAGATGAAGTACCTGCAGAAATTGAAACTGTTATTGAAGAATTAGAAGCTCATCACG
ATCAAGTATTTGATACAGTTGTTACTGAATTGGCTGCGCCAGTTGAAGCAATAACATCAGTTGTATCGTCGCAAGAGAAT
GACGCTCTAGTTGATGAAGAGGACATTACTGCTGTTGTTGAGCAGACATTCCTCGAAGAAGCTGCTGAATTGTTAGAAAT
GGCTGATATGCTATTGAAACAATGGTTTGATCAGCGTACGAATCGTAGTATCTTGCTTCAATTACAAAGGGCCGTGCACA
GCTTGAAGGGTGGTGCACGAATGGTTGGTTTAGAAGCCGTGTATGCGATTGCCTATCAACTTGAGAATGCTTTTGAACAA
TTTGCACTACATCACTTCAACTCGAATATTTATGACCATTTGCTCGAAAGTGCAATTGCATGGCTAAAAGACGCAATTTT
CAAGTACAACTACCAGCATTTTGATGGACTACAACAAAGTTTAGAAAATATTCAATTCTTTGAAACGAATATCCAAATTC
CAGCTAAGTTAAGTAAAGCTGATTTGTTTAGCTCAGAACCCGTGATGACCTTTATACAAGGTGATGGTACAGAACCACCG
CCAATGATGGGAGCATGGGAACAAACTCAACGGCTTGATCAAAATAATGAGATGATCCGAGTTTCGGCAGATTTAATTGA
AAAAATGATTGATCTGTCGGGTGAAAATTCGATTAACCGTTCGCGAATTGAAATGGATTTAAGCCAATTTGGACATACGC
TAGCGGAAATGGAATTGGCCATTCAGCGACTTGCAGATCAGTTGCGTCGAATGGAAGGTGAATTGGAAACCCAAATTATT
GCAAAACACGGTATTGAGCACTCTCGATATACGGAGTTTGATCCGTTAGAGATGGATCGATATTCGTCTTTAAATCAATT
ATCAAAATCTCTTGCTGAATCTGCATCGGATTTGGTCGACTTTAAAAATACATTATCTGACAAAATCAGAGATACAGAAA
GCTTACTTTTACAACAGTCACGGATTCAAGCAGAAATTCAAGAAGGTTTGATGCGAACGCGATTAGTACCTTTCTCTCGA
TTACTGCCGCGTTTACAGCGAATTGTCCGTCAGACATCTACAGCTTTGAACAGACCTGCAGAGCTTTTTGTAAATAATAC
CGAAGGTGAGTTAGATCGCAATATTTTAGAACGGTTAGTGACCCCGCTTGAGCATATGCTCAGAAATGCAATTGACCATG
GTCTAGAAGATCGCGTGCAACGTCAACAAGCACAAAAACCAGAAACTGGACGTATTGAACTTAATATCCATCGTCAAGGT
ACAGATGTTGTTGTTACATTTAAGGATGATGGAAGAGGTATTGATATAGAAAAGGTTCGTCAAAAGGCATTGATGTTTGG
TTTAATTAATCCTGAACAAGTATTGGAACATCAAGATATTTTACAGTTGATTTTCCATCCGGGTTTAAGTACAGCTGATC
AAGTTACTCAAATTTCAGGTCGTGGTGTAGGACTGGATGTAGTGCAAAGTGATATTAAGGCCTTAGGTGGCCATGTGAGT
GTCGACTCTGTATATGGGCAGGGAACTGTCTTTACCATACGCGTTCCAACGACAGTAGCTGTTAGTGATGCTTTAATGGT
TAAAGTTGCTGATCAGCAATTTGCAATCCCTCTGGCCCAAATTGATCGAATTGTACGAGTTTCACCTGCATCATTAGAAC
AATATTTTGGAAGCGTACAAGAATTCTTTGAATTTGAAAATAAACGCTATCCATTGCGCTATTTATCTGAATTTGTTGGT
AGTCAACCAATTCCGCGTTTAAGTGGAATGATGTATTCATTACCAGTATTAATGATTAAGGCAAATAATGGCCAAACTGT
CGCATTATTAGTTGACCAACTGATTGGATCACGTGCACAGATTGTAGTCAAACCAATTGGGCAGCAGTTCTCTAGTATCG
GTGCGATTGCAGGAGCAACTATTTTAGGTGATGGTCAAGTTTGCTTAATTTTAGATGGTCAAAATATTGCTCGCCAAATT
CAGTCTACTCGTCGACTTAAGCTGGTTAATGAAGCGGTTTATAGACAACGAGAGCCTGATGAGCGACGTCTCATCATGAT
TGTGGATGACTCAGTAACTGTACGTAAAGTAACCTCTCGTTTGCTCGAGCGCCAAGGCTATGATGTTGTGACCGCTAAAG
ATGGTGTGGATGCTATAGAGCAGCTAGAAAACATTAAGCCAGATCTGATGCTGCTTGATATTGAAATGCCACGCATGGAT
GGTTTTGAAGTTCTTAATCTTGTACGACATCATGATATGCATCAATACATGCCAATTATTATGATTACATCCCGAACAGG
TGAAAAACATCGTGAACGAGCATTCTCATTAGGTGTAAGTCAATATATGGGTAAACCTTTCCAAGAGGAAGAGTTATTAG
AGAATATCGATACTTTACTTGTGGCGTTTGAAAGTGAGGTCAAATCATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

89.331

100

0.893