Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilS   Type   Regulator
Locus tag   I9190_RS01785 Genome accession   NZ_CP066121
Coordinates   390669..392237 (-) Length   522 a.a.
NCBI ID   WP_004826317.1    Uniprot ID   A0A0A8TRJ6
Organism   Acinetobacter bereziniae strain GD0320     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 385669..397237
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I9190_RS01770 (I9190_01770) gpmI 386390..387937 (+) 1548 WP_121774267.1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase -
  I9190_RS01775 (I9190_01775) - 387966..389138 (+) 1173 WP_042088582.1 S41 family peptidase -
  I9190_RS01780 (I9190_01780) pilR 389236..390651 (-) 1416 WP_005035339.1 sigma-54-dependent transcriptional regulator Regulator
  I9190_RS01785 (I9190_01785) pilS 390669..392237 (-) 1569 WP_004826317.1 sensor histidine kinase Regulator
  I9190_RS01790 (I9190_01790) - 392274..392909 (-) 636 WP_004718392.1 response regulator -
  I9190_RS01795 (I9190_01795) pbpG 393142..394194 (+) 1053 WP_004826319.1 D-alanyl-D-alanine endopeptidase PBP7/8 -
  I9190_RS01800 (I9190_01800) - 394364..394978 (+) 615 WP_004826322.1 DUF6915 family protein -
  I9190_RS01805 (I9190_01805) - 394998..395771 (+) 774 WP_151780920.1 hypothetical protein -
  I9190_RS01810 (I9190_01810) thrC 395835..396974 (-) 1140 WP_151751041.1 threonine synthase -

Sequence

Protein


Download         Length: 522 a.a.        Molecular weight: 59377.04 Da        Isoelectric Point: 5.7777

>NTDB_id=517505 I9190_RS01785 WP_004826317.1 390669..392237(-) (pilS) [Acinetobacter bereziniae strain GD0320]
MSSTVSVPIYQTIYRLGTLYSGYRLIIAFCLIIIFLITLENQPVHYEYPSLYFYSIATFTIIAALQMMLLKFYPHGVAQQ
FIGFFIVDIPFLSILVFALNGPNLAISILFVIAVFTANFLLSKNKALFITLVSVIAIIYQQFLGSYFDFSNLNNISNSAL
LAFLFFMVYGIGQIAINRFQVLESLNTYQSLELFKLQNINRYILEQIEVGYLVLDEKCKIIVSNPAACSLLGISPLYAHE
QYHLSNFQPDLYEILKDAMFRDGERFQFESQQSSFTVDIRVQKLIVPHQALTLLVLEDAQKINQKVQQLKLAALGQLSAS
IAHEIRNPLAAIAQANDLFLMSDEQQQALLHQMITKQTVRINSIIKDTLDMAKNKKTHASQIDLPLFLEDLLLHDLSDAQ
AKIQTEIEADLVIYFDDSQLRQVLVNLLRNALRHNDQNAEYVLVKAFKNDTHICIDVIDYGKGVTKQDLSQLFQPFFSTE
INGTGLGLYLSQTICEANQAKLIYVEQKQQGACFRIECPRMD

Nucleotide


Download         Length: 1569 bp        

>NTDB_id=517505 I9190_RS01785 WP_004826317.1 390669..392237(-) (pilS) [Acinetobacter bereziniae strain GD0320]
ATGTCGTCTACGGTATCTGTGCCTATTTATCAAACAATTTACCGTCTAGGCACACTTTACTCAGGTTATCGACTGATTAT
TGCCTTTTGTTTAATCATTATTTTTCTGATTACCTTAGAAAATCAGCCTGTTCACTACGAATACCCAAGTTTATATTTTT
ATTCGATTGCGACCTTTACCATCATTGCAGCATTGCAAATGATGCTGTTGAAATTTTACCCTCATGGCGTTGCACAGCAG
TTTATTGGCTTTTTTATTGTTGATATTCCATTCCTCAGTATCTTGGTATTTGCGCTGAATGGTCCAAATTTAGCCATCAG
TATTTTATTTGTGATTGCAGTCTTTACTGCAAATTTTTTACTGAGTAAAAACAAAGCATTATTTATTACCTTAGTGTCTG
TCATTGCCATTATCTATCAGCAATTTCTGGGCAGTTATTTTGATTTTTCTAATTTAAATAATATTAGTAATAGTGCCTTA
TTGGCTTTCTTGTTTTTTATGGTGTACGGAATCGGGCAAATTGCAATCAACCGTTTTCAGGTTCTTGAGTCCTTAAATAC
GTACCAATCTTTAGAGCTTTTTAAGCTACAAAACATCAACCGCTATATTTTAGAACAAATCGAAGTCGGTTATTTGGTAC
TCGATGAAAAATGTAAAATTATTGTCAGTAATCCTGCCGCATGTTCACTATTAGGGATATCTCCCCTGTATGCACATGAA
CAATATCATTTATCCAATTTCCAGCCTGATCTCTATGAAATTTTAAAAGATGCCATGTTTCGAGATGGTGAGCGTTTTCA
ATTTGAATCACAGCAATCTTCATTTACCGTTGATATTCGGGTACAAAAACTGATTGTTCCACATCAGGCGCTGACACTTC
TTGTACTTGAAGATGCACAAAAAATAAATCAAAAGGTACAACAGCTTAAACTTGCAGCATTGGGACAATTATCAGCAAGT
ATTGCTCATGAGATACGTAATCCACTCGCTGCCATTGCGCAGGCAAATGATCTTTTTCTGATGAGTGATGAACAGCAGCA
AGCCTTACTCCATCAAATGATTACCAAGCAGACTGTCCGTATTAACAGTATTATCAAAGATACTTTAGATATGGCAAAAA
ACAAAAAAACCCATGCCAGTCAAATCGACTTACCACTATTTTTAGAAGATTTATTGTTACACGATTTAAGTGATGCTCAA
GCTAAAATCCAAACTGAAATTGAAGCAGATCTTGTGATTTATTTTGATGATTCTCAATTAAGGCAAGTACTTGTCAATCT
ATTGCGTAATGCATTACGCCATAATGATCAAAATGCGGAATACGTTTTGGTCAAGGCGTTTAAAAATGACACGCATATTT
GTATAGATGTGATTGATTATGGGAAAGGCGTCACAAAACAAGACCTTTCACAATTATTTCAGCCATTTTTTAGTACCGAA
ATCAATGGAACTGGTTTAGGATTGTACCTATCGCAAACTATATGCGAAGCAAATCAAGCGAAATTAATTTACGTTGAGCA
AAAACAACAAGGGGCATGCTTTCGTATCGAATGCCCACGCATGGATTAG

Domains

Predicted by InterproScan.

His Kinase A (phospho-acceptor) domain (HisKA)

(313-374)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(416-519)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0A8TRJ6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilS Acinetobacter baumannii strain A118

58.431

97.701

0.571