Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   I6I02_RS01435 Genome accession   NZ_CP066093
Coordinates   285221..285952 (+) Length   243 a.a.
NCBI ID   WP_198463665.1    Uniprot ID   -
Organism   Streptococcus salivarius strain FDAARGOS_1045     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 280221..290952
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6I02_RS01400 (I6I02_01400) - 280681..281646 (-) 966 WP_002890057.1 IS3 family transposase -
  I6I02_RS01405 (I6I02_01405) - 281643..282320 (-) 678 WP_002890056.1 helix-turn-helix domain-containing protein -
  I6I02_RS11070 - 282765..282890 (+) 126 WP_002884447.1 hypothetical protein -
  I6I02_RS01410 (I6I02_01410) - 282908..283516 (+) 609 WP_002884297.1 DUF4230 domain-containing protein -
  I6I02_RS01415 (I6I02_01415) - 283680..284075 (+) 396 WP_198463664.1 hypothetical protein -
  I6I02_RS01420 (I6I02_01420) - 284093..284260 (+) 168 WP_162837453.1 hypothetical protein -
  I6I02_RS01425 (I6I02_01425) - 284441..284740 (-) 300 WP_195435440.1 hypothetical protein -
  I6I02_RS01430 (I6I02_01430) - 284737..285156 (-) 420 WP_037599159.1 HIT family protein -
  I6I02_RS01435 (I6I02_01435) pptA 285221..285952 (+) 732 WP_198463665.1 ABC transporter ATP-binding protein Regulator
  I6I02_RS01440 (I6I02_01440) pptB 285952..286986 (+) 1035 WP_410532096.1 ABC transporter permease Regulator
  I6I02_RS01445 (I6I02_01445) ccrZ 287044..287835 (+) 792 WP_002884270.1 cell cycle regulator CcrZ -
  I6I02_RS01450 (I6I02_01450) trmB 287845..288486 (+) 642 WP_037599162.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  I6I02_RS01460 (I6I02_01460) - 288741..289922 (-) 1182 WP_037599163.1 NAD(P)/FAD-dependent oxidoreductase -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 26808.04 Da        Isoelectric Point: 4.4174

>NTDB_id=517340 I6I02_RS01435 WP_198463665.1 285221..285952(+) (pptA) [Streptococcus salivarius strain FDAARGOS_1045]
MLKLEKVTGGYANIPVLKDVTFEVADGELVGLIGLNGAGKSTTINEIIGLLTPYGGQIAIDGLTIQQDPASYRQKIGYIP
ETPSLYEELTLREHLETVLMAYGLDVTEGMARADKYLKLFRLDEKLDWFPTQFSKGMKQKVMIICAFIVNPSLLIVDEPF
LGLDPLAISDLIELLAEEKANGKAILMSTHVLDSAEKMCDRFVILHHGQVLAQGTLEELRQTFGDDSASLNDIYMQLTKG
ELS

Nucleotide


Download         Length: 732 bp        

>NTDB_id=517340 I6I02_RS01435 WP_198463665.1 285221..285952(+) (pptA) [Streptococcus salivarius strain FDAARGOS_1045]
ATGCTTAAATTAGAAAAGGTGACGGGTGGTTACGCTAATATTCCCGTCCTAAAAGATGTGACTTTTGAGGTGGCTGATGG
TGAATTGGTTGGTCTCATTGGTCTTAATGGTGCTGGGAAATCAACAACAATTAACGAGATTATTGGTCTCTTAACACCTT
ATGGGGGACAGATTGCCATTGATGGGTTAACTATTCAACAAGATCCAGCTAGCTATCGTCAGAAGATTGGCTATATTCCT
GAAACGCCAAGTCTCTATGAAGAGTTGACGCTTCGTGAACATTTGGAAACGGTGTTGATGGCCTATGGTCTTGATGTGAC
TGAGGGGATGGCACGTGCGGACAAGTACCTCAAACTCTTTCGCTTAGATGAAAAATTGGACTGGTTCCCGACTCAGTTTT
CAAAGGGAATGAAGCAGAAGGTTATGATTATCTGTGCCTTTATTGTTAACCCCAGTCTTCTCATTGTTGATGAGCCCTTC
CTAGGTTTGGATCCCTTGGCGATTTCGGACTTGATTGAGCTTTTGGCTGAGGAAAAAGCGAATGGTAAGGCGATTCTCAT
GTCTACCCACGTTTTGGATTCAGCTGAAAAGATGTGTGACCGCTTTGTGATTTTGCACCATGGACAGGTCTTGGCACAGG
GAACTCTCGAGGAGCTCCGTCAGACTTTTGGCGATGATAGTGCTAGTCTTAACGATATCTACATGCAGTTAACTAAGGGA
GAATTGTCATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

98.765

100

0.988
  pptA Streptococcus thermophilus LMD-9

97.531

100

0.975