Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   I6H67_RS04620 Genome accession   NZ_CP066081
Coordinates   842591..843853 (-) Length   420 a.a.
NCBI ID   WP_061812048.1    Uniprot ID   A0A1Y0VW88
Organism   Pediococcus pentosaceus strain FDAARGOS_1010     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 837591..848853
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6H67_RS04615 (I6H67_04615) - 840857..842563 (-) 1707 WP_198469675.1 proline--tRNA ligase -
  I6H67_RS04620 (I6H67_04620) eeP 842591..843853 (-) 1263 WP_061812048.1 RIP metalloprotease RseP Regulator
  I6H67_RS04625 (I6H67_04625) - 843877..844662 (-) 786 WP_198469677.1 phosphatidate cytidylyltransferase -
  I6H67_RS04630 (I6H67_04630) - 844673..845422 (-) 750 WP_198469679.1 isoprenyl transferase -
  I6H67_RS04635 (I6H67_04635) frr 845680..846240 (-) 561 WP_198469681.1 ribosome recycling factor -
  I6H67_RS04640 (I6H67_04640) pyrH 846240..846965 (-) 726 WP_002833607.1 UMP kinase -
  I6H67_RS04645 (I6H67_04645) tsf 847119..847997 (-) 879 WP_198469684.1 translation elongation factor Ts -

Sequence

Protein


Download         Length: 420 a.a.        Molecular weight: 46346.98 Da        Isoelectric Point: 9.6829

>NTDB_id=517241 I6H67_RS04620 WP_061812048.1 842591..843853(-) (eeP) [Pediococcus pentosaceus strain FDAARGOS_1010]
MITTIITFIVVFLILVVVHEYGHFVAAKKSGILVREFSIGMGPKIVDLKRNGTTYTLRILPIGGYVRMAGLDEQEDELKA
GQHVTLTTDNTGQVTIINTSSKVQNLMGIPVDVTSFDLQDKLFIEGYENGNEDEVKHFEIDHDASIVESDGTEVRIAPRD
VQFQSAKIWQRLITNFAGPFNNFVLAIVVFAIMGVMQGAVPANTNQVQVVENGVAQKAGIKNNDRIVRVEGQKTDNWSQL
SKAVSARPNQKTTLEVLRQKQIKKITLTPKLASNGSKKVGMIGVQSSMTTNLGKRVLYGFTGTWQMAKSLFTALGQMLHG
FSLNDLGGPVAIYATTSQATHQGFMSVLYVLGFLSLNLGIVNLLPIPALDGGKILLNLVEMIRRKPLKVETENVITLIGF
GFLMILMLLVTWNDIQRYFF

Nucleotide


Download         Length: 1263 bp        

>NTDB_id=517241 I6H67_RS04620 WP_061812048.1 842591..843853(-) (eeP) [Pediococcus pentosaceus strain FDAARGOS_1010]
ATGATAACTACGATTATTACCTTTATTGTTGTATTTTTAATTTTAGTTGTTGTCCATGAGTATGGGCATTTTGTTGCTGC
TAAAAAGTCCGGTATTTTAGTTCGTGAATTTTCAATTGGGATGGGTCCTAAAATTGTTGATTTGAAGCGTAATGGAACTA
CGTATACTTTACGGATTCTTCCCATTGGTGGTTATGTTCGAATGGCGGGGCTCGATGAACAAGAAGATGAATTGAAAGCA
GGACAACATGTTACATTAACCACGGATAATACTGGACAAGTGACGATTATTAATACTTCTAGTAAAGTTCAAAATTTGAT
GGGCATTCCAGTTGATGTAACCAGTTTTGACTTACAAGATAAATTATTCATTGAAGGTTATGAAAATGGTAACGAAGACG
AAGTTAAACATTTTGAAATTGATCATGATGCATCGATAGTCGAATCCGACGGGACAGAAGTTCGAATTGCACCGCGTGAT
GTTCAATTTCAATCTGCTAAGATTTGGCAGCGACTAATTACTAATTTTGCTGGACCATTTAATAATTTTGTTTTGGCCAT
CGTTGTTTTTGCGATAATGGGAGTTATGCAGGGAGCAGTTCCGGCTAATACTAACCAAGTACAAGTCGTTGAAAATGGTG
TTGCTCAAAAAGCAGGAATTAAAAATAATGATCGTATTGTTAGAGTTGAAGGACAAAAAACAGATAATTGGAGTCAATTA
TCTAAGGCAGTTTCAGCTCGTCCAAATCAAAAAACGACTTTAGAAGTATTACGTCAAAAGCAAATAAAGAAAATCACATT
AACACCTAAGTTAGCAAGTAATGGTAGTAAAAAAGTGGGTATGATTGGTGTTCAATCATCCATGACAACTAATTTAGGTA
AGCGAGTTTTATATGGTTTCACTGGAACTTGGCAAATGGCTAAGAGTTTGTTTACCGCTTTAGGACAGATGCTACATGGC
TTTAGTTTGAATGATTTAGGCGGTCCTGTTGCAATTTATGCCACGACCTCTCAAGCTACCCATCAAGGCTTCATGTCAGT
GCTGTATGTGCTAGGTTTTCTATCCCTAAACTTGGGGATTGTTAACTTATTACCAATTCCAGCTTTGGATGGAGGAAAAA
TTCTCCTAAATCTCGTTGAAATGATTCGAAGAAAACCTTTAAAAGTTGAAACCGAAAATGTGATTACGCTAATTGGCTTT
GGATTTTTAATGATATTAATGCTGTTAGTTACTTGGAATGATATTCAAAGATACTTTTTTTAA

Domains

Predicted by InterproScan.

PDZ domain (PDZ_6)

(208-258)

Peptidase family M50 (Peptidase_M50)

(7-406)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1Y0VW88

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

47.877

100

0.483
  eeP Streptococcus thermophilus LMD-9

47.877

100

0.483