Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   I6I28_RS06620 Genome accession   NZ_CP066062
Coordinates   1378749..1379651 (+) Length   300 a.a.
NCBI ID   WP_103369869.1    Uniprot ID   -
Organism   Staphylococcus pettenkoferi strain FDAARGOS_1071     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1373749..1384651
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6I28_RS06605 (I6I28_06605) - 1374605..1375747 (+) 1143 WP_049405399.1 globin domain-containing protein -
  I6I28_RS06610 (I6I28_06610) - 1376270..1377688 (+) 1419 WP_103369868.1 MDR family MFS transporter -
  I6I28_RS06615 (I6I28_06615) braR 1378067..1378735 (+) 669 WP_002472782.1 response regulator transcription factor Regulator
  I6I28_RS06620 (I6I28_06620) braS 1378749..1379651 (+) 903 WP_103369869.1 sensor histidine kinase Regulator
  I6I28_RS06625 (I6I28_06625) - 1380396..1382507 (-) 2112 WP_049405393.1 sulfite reductase flavoprotein subunit alpha -
  I6I28_RS06630 (I6I28_06630) - 1382784..1383524 (-) 741 WP_049405392.1 cyclase family protein -

Sequence

Protein


Download         Length: 300 a.a.        Molecular weight: 34997.61 Da        Isoelectric Point: 8.0774

>NTDB_id=517023 I6I28_RS06620 WP_103369869.1 1378749..1379651(+) (braS) [Staphylococcus pettenkoferi strain FDAARGOS_1071]
MNFLKTISNEALIILLILVLFLFIFFVFSLPMTPLLLALAIIVFVFAIYAFYRYISYQKHQRLEEQVEKLEQSLHNVRNE
QIEYKKEVEAYFLTWVHQMKTPITASKLLLARNEEGMVNQLRQEILQIDNYSNLALSYLKLLNHNTDMVLAPVTIDELIR
PLIKKYSIQFIENQTKIHYEKSTAKVITDARWCSIMIEQLLNNALKYARGQDIWINYNENEQKLEIRDNGIGISRADLPK
IFDQGYSGYNGRLHEKSSGIGLFIVKRISKHLNHSVEVESELGEGARFTIQFPQHGKERG

Nucleotide


Download         Length: 903 bp        

>NTDB_id=517023 I6I28_RS06620 WP_103369869.1 1378749..1379651(+) (braS) [Staphylococcus pettenkoferi strain FDAARGOS_1071]
ATGAATTTCTTAAAAACCATCAGTAATGAAGCACTGATTATTTTACTCATATTAGTGTTATTCTTATTCATATTCTTTGT
CTTTTCATTACCTATGACGCCGTTATTGTTAGCCTTAGCGATTATCGTCTTTGTCTTCGCTATTTATGCATTTTATCGTT
ATATCAGCTATCAAAAGCATCAGCGTCTTGAGGAACAAGTAGAAAAGTTAGAGCAAAGTCTGCATAATGTACGAAATGAA
CAAATTGAATATAAGAAGGAAGTAGAAGCTTACTTTCTGACGTGGGTGCATCAGATGAAGACGCCGATTACTGCATCTAA
ACTTCTGCTCGCTAGAAACGAAGAGGGCATGGTGAATCAACTGAGACAAGAAATACTTCAAATTGACAACTATTCCAACT
TGGCGCTAAGCTATTTGAAATTATTGAATCATAATACGGATATGGTGCTCGCACCTGTCACGATTGATGAGTTGATTCGA
CCGCTTATTAAGAAATATTCAATTCAATTTATAGAGAATCAAACGAAGATCCACTATGAGAAATCGACTGCTAAAGTAAT
TACTGATGCACGTTGGTGTTCTATTATGATTGAACAACTCTTGAATAACGCTTTAAAATACGCGCGAGGACAAGATATTT
GGATTAATTATAATGAGAATGAACAGAAACTTGAAATAAGAGACAATGGCATTGGGATTAGTCGTGCAGATTTGCCGAAA
ATCTTTGACCAAGGTTATTCAGGATACAATGGCCGTTTACATGAAAAATCAAGTGGAATTGGATTGTTTATTGTGAAGCG
GATTTCCAAGCACTTGAATCACTCTGTAGAGGTAGAATCTGAACTAGGTGAGGGTGCACGATTTACTATTCAATTTCCAC
AGCACGGCAAAGAAAGAGGATAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(192-294)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

57.679

97.667

0.563