Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   I6I28_RS06615 Genome accession   NZ_CP066062
Coordinates   1378067..1378735 (+) Length   222 a.a.
NCBI ID   WP_002472782.1    Uniprot ID   -
Organism   Staphylococcus pettenkoferi strain FDAARGOS_1071     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1373067..1383735
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6I28_RS06605 (I6I28_06605) - 1374605..1375747 (+) 1143 WP_049405399.1 globin domain-containing protein -
  I6I28_RS06610 (I6I28_06610) - 1376270..1377688 (+) 1419 WP_103369868.1 MDR family MFS transporter -
  I6I28_RS06615 (I6I28_06615) braR 1378067..1378735 (+) 669 WP_002472782.1 response regulator transcription factor Regulator
  I6I28_RS06620 (I6I28_06620) braS 1378749..1379651 (+) 903 WP_103369869.1 sensor histidine kinase Regulator
  I6I28_RS06625 (I6I28_06625) - 1380396..1382507 (-) 2112 WP_049405393.1 sulfite reductase flavoprotein subunit alpha -
  I6I28_RS06630 (I6I28_06630) - 1382784..1383524 (-) 741 WP_049405392.1 cyclase family protein -

Sequence

Protein


Download         Length: 222 a.a.        Molecular weight: 26044.86 Da        Isoelectric Point: 5.1489

>NTDB_id=517022 I6I28_RS06615 WP_002472782.1 1378067..1378735(+) (braR) [Staphylococcus pettenkoferi strain FDAARGOS_1071]
MKILIIEDDLVIAESLQAELNKWHYEVDIARDFSAIMEEFEQSNPHLILLDIKLPSFNGFHWCQEIRRHSNVPIIFISSR
TDNMDQIMAIQMGGDDFIEKPFDMSLTIAKIQALMRRTYNFTVDHNRLEVQNCQLLIDEAKLSYQGQSEKLSFTELQIMQ
SLFQNEGKYVSKTDLIEKCWESEHFIDDNTLAVNMTRIRKKLQNIGLPHFIETKKNVGYRVN

Nucleotide


Download         Length: 669 bp        

>NTDB_id=517022 I6I28_RS06615 WP_002472782.1 1378067..1378735(+) (braR) [Staphylococcus pettenkoferi strain FDAARGOS_1071]
ATGAAGATATTAATCATTGAAGATGATTTGGTTATCGCAGAAAGTTTACAAGCTGAACTCAATAAATGGCACTACGAGGT
TGATATTGCACGAGATTTCAGTGCGATTATGGAAGAATTTGAACAGAGTAATCCGCATCTCATCTTATTAGATATTAAAT
TACCGTCATTCAACGGTTTCCATTGGTGCCAAGAAATACGACGTCACTCTAACGTGCCCATTATCTTTATTAGCTCGCGT
ACGGACAATATGGATCAAATTATGGCAATTCAAATGGGCGGCGATGATTTTATTGAGAAACCGTTTGATATGTCATTAAC
GATAGCTAAGATTCAAGCTCTGATGCGACGCACGTACAACTTCACAGTAGACCACAATCGTCTTGAAGTGCAGAACTGTC
AGCTACTGATAGATGAAGCGAAGTTAAGCTATCAAGGACAATCTGAGAAATTATCCTTTACTGAGCTACAAATTATGCAG
TCATTATTTCAAAATGAAGGAAAGTATGTAAGTAAGACAGATTTAATTGAAAAATGTTGGGAATCTGAACATTTTATCGA
CGATAATACACTGGCAGTCAATATGACTCGCATTCGCAAGAAACTACAAAATATCGGCTTACCTCATTTTATTGAAACGA
AGAAAAATGTAGGCTATCGGGTAAATTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-111)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

70.136

99.55

0.698