Detailed information NTG0051686

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: KW2_RS10100
• Genome accession: NC_022369
• Coordinates: 2109884..2110963 (+)
• Length: 359 a.a.
• NCBI ID: WP_021037873.1
• Uniprot ID: -
• Organism: Lactococcus cremoris subsp. cremoris KW2
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2104884..2115963

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KW2_RS10075 (kw2_2027)	pgsA	2105042..2105614 (-)	573	WP_011835915.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
KW2_RS10080 (kw2_2028)	-	2105656..2106552 (-)	897	WP_021037869.1	helix-turn-helix domain-containing protein	-
KW2_RS10085 (kw2_2029)	yfmH	2106765..2108048 (-)	1284	WP_021037870.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
KW2_RS10090 (kw2_2030)	yfmF	2108038..2109324 (-)	1287	WP_187288328.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
KW2_RS10095 (kw2_2031)	yaaA	2109522..2109884 (+)	363	WP_021037872.1	S4 domain-containing protein YaaA	-
KW2_RS10100 (kw2_2032)	recF	2109884..2110963 (+)	1080	WP_021037873.1	DNA replication/repair protein RecF	Machinery gene
KW2_RS10105 (kw2_2033)	-	2111068..2111436 (-)	369	WP_021037874.1	carboxymuconolactone decarboxylase family protein	-
KW2_RS10110 (kw2_2034)	-	2111513..2111890 (+)	378	WP_011677031.1	MerR family transcriptional regulator	-
KW2_RS10115 (kw2_2035)	-	2111907..2112863 (-)	957	WP_041168660.1	alpha/beta hydrolase	-
KW2_RS10120 (kw2_2036)	galE	2112983..2113963 (-)	981	WP_014573226.1	UDP-glucose 4-epimerase GalE	-
KW2_RS10125 (kw2_2037)	-	2114080..2115561 (-)	1482	WP_021037876.1	UDP-glucose--hexose-1-phosphate uridylyltransferase	-

Sequence

Protein

• Length: 359 a.a.
• Molecular weight: 41654.61 Da
• Isoelectric Point: 6.8656

>NTDB_id=51686 KW2_RS10100 WP_021037873.1 2109884..2110963(+) (recF) [Lactococcus cremoris subsp. cremoris KW2]
MKLKQIELKNFRNYEDLKLDFHPNLNIFLGQNAQGKTNILEAIHFLALTRSHRTSHDKELIRWSGQEMKVSGLVEKAHAT
VPLEVQLSSKGRIAKANHLKENRLADYIGQLKILMFAPENLELVKGSPATRRRFMDIELGQIHAVYLYDSMRYNRALKER
NAYLKFDQAKIDKNFLTVLDEQLAEHGNKIMFERKTFIEKLEIHAKKIHEQLTHGLETLKITYNQNVKTDFSKELLSRQD
HDIFRHQTTVGPHRDDLQFFINEINVADFGSQGQQRTVALSIKLAEIDLIFEETGEYPILLLDDVMSELDNHRQLDLIET
SLGKTQTFITTTTLDHLKNLPENLSIFHVTDGTIEKEKE

Nucleotide

• Length: 1080 bp

>NTDB_id=51686 KW2_RS10100 WP_021037873.1 2109884..2110963(+) (recF) [Lactococcus cremoris subsp. cremoris KW2]
ATGAAACTCAAGCAAATTGAACTTAAAAATTTTCGGAATTATGAAGATTTAAAACTCGACTTCCATCCCAATCTCAATAT
CTTCTTGGGTCAAAATGCTCAAGGAAAGACAAATATTCTTGAAGCTATTCACTTTTTAGCCCTTACTCGTAGTCACAGAA
CGAGTCATGACAAAGAGTTAATTCGTTGGTCTGGGCAAGAAATGAAAGTTTCAGGATTGGTTGAAAAGGCTCATGCAACC
GTTCCTCTTGAAGTTCAATTAAGTTCCAAAGGACGAATTGCTAAGGCTAATCATCTGAAGGAAAATCGCTTGGCTGACTA
TATCGGACAACTAAAAATCTTGATGTTTGCGCCTGAAAATTTAGAGTTGGTCAAAGGTTCGCCAGCCACTCGCAGACGAT
TTATGGATATTGAACTCGGACAAATTCACGCTGTTTATCTTTATGATTCCATGCGTTATAATCGTGCTTTAAAAGAGCGA
AATGCTTATTTGAAATTTGACCAAGCAAAGATTGACAAAAACTTTTTGACGGTTCTTGATGAACAATTGGCTGAACACGG
CAATAAAATCATGTTTGAACGTAAAACTTTCATTGAAAAGCTTGAAATTCATGCAAAAAAAATTCATGAACAGTTAACTC
ATGGTTTGGAAACATTAAAAATCACTTATAATCAAAATGTAAAAACTGATTTTTCAAAAGAATTATTGAGTCGACAAGAT
CATGATATTTTTAGACATCAGACTACCGTCGGCCCCCATCGAGATGATTTACAGTTCTTTATCAATGAGATCAATGTTGC
TGATTTTGGTAGTCAGGGACAACAACGAACCGTTGCTCTTTCGATTAAATTGGCCGAAATTGATTTGATTTTTGAGGAAA
CGGGTGAGTATCCTATTTTACTTTTAGACGATGTCATGAGTGAACTTGACAATCATCGTCAGCTGGATTTGATTGAAACA
AGTTTAGGTAAAACCCAGACTTTTATTACCACAACCACTCTTGACCATCTCAAAAATTTACCGGAAAACTTGAGTATTTT
CCATGTTACTGATGGGACAATTGAGAAAGAAAAAGAATAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	55	100	0.552
recF	Bacillus subtilis subsp. subtilis str. 168	45.699	100	0.474