Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptB   Type   Regulator
Locus tag   I6H72_RS04675 Genome accession   NZ_CP066055
Coordinates   952813..953859 (-) Length   348 a.a.
NCBI ID   WP_020997603.1    Uniprot ID   U2ZRI1
Organism   Streptococcus constellatus strain FDAARGOS_1015     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 947813..958859
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6H72_RS04645 (I6H72_04645) rnpM 947986..948282 (-) 297 WP_003070354.1 RNase P modulator RnpM -
  I6H72_RS04650 (I6H72_04650) nusA 948293..949486 (-) 1194 WP_003078357.1 transcription termination factor NusA -
  I6H72_RS04655 (I6H72_04655) rimP 949540..950028 (-) 489 WP_006267077.1 ribosome maturation factor RimP -
  I6H72_RS04660 (I6H72_04660) - 950240..950932 (-) 693 WP_006267630.1 VIT family protein -
  I6H72_RS04665 (I6H72_04665) trmB 951333..951968 (-) 636 WP_006267578.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  I6H72_RS04670 (I6H72_04670) ccrZ 951965..952762 (-) 798 WP_006267497.1 cell cycle regulator CcrZ -
  I6H72_RS04675 (I6H72_04675) pptB 952813..953859 (-) 1047 WP_020997603.1 ABC transporter permease Regulator
  I6H72_RS04680 (I6H72_04680) pptA 953856..954587 (-) 732 WP_003033712.1 ABC transporter ATP-binding protein Regulator
  I6H72_RS04685 (I6H72_04685) - 954656..955066 (+) 411 WP_006267256.1 HIT family protein -
  I6H72_RS04690 (I6H72_04690) - 955076..955363 (+) 288 WP_006267192.1 hypothetical protein -
  I6H72_RS04695 (I6H72_04695) brpA 955404..956510 (-) 1107 WP_198458381.1 biofilm formation/cell division transcriptional regulator BrpA -
  I6H72_RS04700 (I6H72_04700) - 956517..957038 (-) 522 WP_198458382.1 GNAT family N-acetyltransferase -
  I6H72_RS04705 (I6H72_04705) tsaE 957031..957471 (-) 441 WP_195995760.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -

Sequence

Protein


Download         Length: 348 a.a.        Molecular weight: 41036.43 Da        Isoelectric Point: 10.4750

>NTDB_id=516853 I6H72_RS04675 WP_020997603.1 952813..953859(-) (pptB) [Streptococcus constellatus strain FDAARGOS_1015]
MRNLFQKRRQVFRNQCLKYSRYVFNDHFVLFLLVFIGFLAVQYSQLLRSFPKNHLPIILALVVLLFLLLPLGRIATYMEK
PDSLFLLVKEEELKSYLQEQTRLSYRLWALLQTVVLLLLVPLFLALGMPLWGWFILVFLMLIAKWFVFLQKSQKFYQGAG
VNWSYLIAYEERRKQTILRFFALFTNVKGISNSVKRRAYLDGLTNILPKRQSTTWQNIYLRSYLRNGDFLALTIRLLFLS
LLGIGFISQSWIAAIFVALLNYLLLFQLTALYNAFDYQYLTFLFPLETGLKLKGVKQVIILIGYSVLFVETMMALLFFQD
RVALLFMIGITLLLYFIYLPFKLRSLVD

Nucleotide


Download         Length: 1047 bp        

>NTDB_id=516853 I6H72_RS04675 WP_020997603.1 952813..953859(-) (pptB) [Streptococcus constellatus strain FDAARGOS_1015]
ATGAGAAATCTGTTTCAAAAGCGCAGGCAAGTATTTCGCAATCAATGTTTGAAGTATTCACGCTATGTTTTTAATGACCA
TTTTGTCCTCTTTTTATTGGTCTTTATTGGCTTTTTAGCTGTTCAATACAGTCAACTGTTACGAAGTTTTCCTAAAAATC
ACCTGCCAATCATTCTTGCTTTAGTGGTTCTTTTGTTCTTATTATTGCCTTTGGGACGAATCGCGACTTATATGGAAAAA
CCAGATAGTCTGTTTTTATTGGTCAAAGAAGAGGAATTAAAAAGCTACCTACAAGAACAAACGCGTTTATCTTATCGATT
ATGGGCCTTGCTTCAAACCGTTGTGTTGTTACTATTAGTACCGCTTTTTCTTGCCTTAGGCATGCCGCTTTGGGGCTGGT
TTATTCTTGTTTTTCTTATGTTGATAGCAAAATGGTTCGTATTTTTGCAGAAAAGTCAAAAATTTTACCAAGGTGCAGGG
GTGAATTGGAGCTATCTCATTGCTTATGAAGAAAGACGTAAGCAGACAATCCTACGTTTCTTTGCTCTCTTTACCAATGT
CAAAGGAATTTCTAATAGTGTGAAACGCCGTGCGTATCTTGATGGTTTGACAAATATTCTACCCAAAAGACAGTCAACTA
CTTGGCAAAATATATATTTGCGTTCTTATTTACGAAATGGTGATTTTCTGGCCTTGACTATACGGTTGCTGTTTCTGTCT
CTTTTGGGAATTGGTTTTATCAGTCAATCATGGATTGCGGCTATTTTCGTAGCTTTGTTGAATTATCTCTTGCTATTTCA
GTTGACAGCCTTGTACAATGCTTTTGATTATCAATATTTGACGTTCTTATTTCCTTTGGAAACTGGATTGAAATTAAAAG
GAGTGAAACAAGTGATTATTCTTATTGGCTACAGCGTGCTTTTTGTGGAAACAATGATGGCTTTGTTGTTTTTCCAAGAT
AGAGTAGCTTTGCTTTTTATGATTGGAATTACATTGCTACTTTATTTCATCTATTTACCATTTAAATTAAGAAGTTTGGT
TGACTAA

Domains

Predicted by InterproScan.

Bacterial ABC transporter protein EcsB (EcsB)

(3-158)

Bacterial ABC transporter protein EcsB (EcsB)

(160-330)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB U2ZRI1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

48.276

100

0.483
  pptB Streptococcus salivarius strain HSISS4

47.414

100

0.474