Detailed information NTG0516763

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: I6I22_RS15350
• Genome accession: NZ_CP066045
• Coordinates: 3250478..3252703 (-)
• Length: 741 a.a.
• NCBI ID: WP_101274847.1
• Uniprot ID: -
• Organism: Stutzerimonas stutzeri strain FDAARGOS_1065
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3245478..3257703

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6I22_RS15315 (I6I22_15310)	murB	3245871..3246890 (-)	1020	WP_101274850.1	UDP-N-acetylmuramate dehydrogenase	-
I6I22_RS15320 (I6I22_15315)	-	3246887..3247351 (-)	465	WP_101274849.1	low molecular weight protein-tyrosine-phosphatase	-
I6I22_RS15325 (I6I22_15320)	kdsB	3247353..3248117 (-)	765	WP_044316182.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
I6I22_RS15330 (I6I22_15325)	-	3248114..3248299 (-)	186	WP_003299639.1	Trm112 family protein	-
I6I22_RS15335 (I6I22_15330)	lpxK	3248345..3249349 (-)	1005	WP_101274848.1	tetraacyldisaccharide 4'-kinase	-
I6I22_RS15340 (I6I22_15335)	-	3249349..3249777 (-)	429	WP_014820907.1	ExbD/TolR family protein	-
I6I22_RS15345 (I6I22_15340)	-	3249774..3250406 (-)	633	WP_031298327.1	MotA/TolQ/ExbB proton channel family protein	-
I6I22_RS15350 (I6I22_15345)	comA	3250478..3252703 (-)	2226	WP_101274847.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
I6I22_RS15355 (I6I22_15350)	-	3252854..3253369 (+)	516	WP_003299644.1	DUF2062 domain-containing protein	-
I6I22_RS15360 (I6I22_15355)	-	3253376..3254620 (-)	1245	WP_003299645.1	lipoprotein-releasing ABC transporter permease subunit	-
I6I22_RS15365 (I6I22_15360)	lolD	3254620..3255318 (-)	699	WP_042922568.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
I6I22_RS15370 (I6I22_15365)	-	3255326..3256573 (-)	1248	WP_101274846.1	lipoprotein-releasing ABC transporter permease subunit	-
I6I22_RS15375 (I6I22_15370)	-	3256610..3257245 (+)	636	WP_101274845.1	PilZ domain-containing protein	-
I6I22_RS15380 (I6I22_15375)	-	3257249..3257557 (+)	309	WP_101274844.1	phosphodiesterase	-

Sequence

Protein

• Length: 741 a.a.
• Molecular weight: 80934.40 Da
• Isoelectric Point: 9.9822

>NTDB_id=516763 I6I22_RS15350 WP_101274847.1 3250478..3252703(-) (comA) [Stutzerimonas stutzeri strain FDAARGOS_1065]
MRTWMLALAAGLVLPRFLPALPSVWILCVLGVLGGLLLSRRRWASSGLLLLGFAWACWQCQSAIDDRLPVSQDGRTYWIQ
GTVSGLPTSTGDVVRFELEDIESRHAGLPSKVRLSWYGGPQVRAGERWRLAARLKRPRGLVNPHAFDYEAWLLARRIGAT
GSVKAGERLFAPHSVNSWRDRLRLRLMEVSASGRQGAIAALVVGDDSGLSREDWQVLQDTGTVHLMVISGQHIGMLAGLL
YGLVALAARWGFWPSRWPWLPCACALALAGALSYGWLAGFDVPVRRACLMVAVVLLWRLRFRHLGVWQPLLLALNGVLLV
DPLVSLQPGFWLSFGAVAVLALAFSGRLGRWKWWATLTRAQWAASLGLLPLLLTLGLPVSASGPLANLIAVPWVSLTVPF
ALLGTLLLPLGAIGETLLWLVGSSLALLFELLSAMATWQPAWLAVGIPIWALLMIGLGVLLMLLPSGVPVRALGLVLLAP
LVYPPYSEVAEGRAQVSVLDVGQGLSVLVRTREHALLYDAGPRQGDFDTGERVVFPSLRSLGVKRLDILLLSHADNDHSG
GAQAIRRLLPVARTVSGEPQRHATDLNAKPCENGAEWRWNGVRFSLWQWQAARESNQTSCVLLVEANGERVLLTGDIDQA
AEQALLLSGKDVKAQWLLLPHHGSRSSSSEPFLRAVEPSAALISRSLHNAFGHPHPTVTARLEASAIDVYDTALHGAIRI
DLGDFSVAEIQRAERRFWREK

Nucleotide

• Length: 2226 bp

>NTDB_id=516763 I6I22_RS15350 WP_101274847.1 3250478..3252703(-) (comA) [Stutzerimonas stutzeri strain FDAARGOS_1065]
ATGCGCACATGGATGTTGGCGCTCGCGGCAGGCCTCGTCTTGCCCCGTTTCTTACCGGCGTTGCCCTCTGTCTGGATCTT
GTGCGTGCTTGGCGTGCTGGGGGGCTTGCTGCTTTCGCGTCGGCGCTGGGCGTCGTCTGGGTTGCTTCTCCTCGGGTTCG
CCTGGGCATGCTGGCAGTGCCAGAGTGCCATTGATGATCGCCTGCCCGTTTCGCAAGATGGCCGGACATACTGGATCCAG
GGGACGGTCAGTGGATTGCCCACCAGCACGGGCGATGTCGTGCGCTTCGAGTTGGAGGATATCGAGTCGAGGCATGCTGG
GCTGCCGTCGAAGGTGCGTCTGTCCTGGTACGGCGGCCCGCAAGTGCGGGCCGGCGAGCGTTGGCGGCTTGCGGCTCGAC
TGAAACGTCCGCGTGGCCTGGTCAATCCGCATGCGTTCGACTACGAAGCCTGGTTGCTGGCGCGTCGCATTGGCGCGACC
GGTTCGGTCAAGGCGGGAGAGCGCCTCTTCGCGCCGCACTCCGTGAATAGTTGGCGCGACCGCTTGAGGCTCCGTCTGAT
GGAGGTCTCCGCGTCCGGTCGACAAGGCGCGATCGCGGCACTGGTGGTCGGTGATGACTCCGGCCTGAGTCGTGAGGATT
GGCAGGTGTTGCAGGACACCGGCACGGTGCACCTGATGGTCATATCGGGACAGCACATCGGCATGCTGGCTGGCTTGCTA
TACGGACTGGTTGCGCTAGCAGCTCGATGGGGCTTCTGGCCCAGCCGTTGGCCCTGGCTTCCATGCGCATGCGCGTTGGC
TCTCGCTGGTGCGCTTTCCTATGGATGGCTCGCGGGGTTCGATGTGCCGGTGCGTCGTGCGTGTCTCATGGTCGCCGTGG
TCCTGCTCTGGCGCTTGCGCTTTCGTCATCTGGGTGTCTGGCAGCCGCTGTTGCTGGCGCTGAATGGTGTCCTGCTGGTC
GATCCCCTGGTCTCGTTGCAGCCGGGGTTTTGGCTCTCATTCGGGGCCGTTGCGGTGCTCGCGCTGGCGTTCTCCGGTCG
GCTCGGCCGATGGAAGTGGTGGGCGACGCTGACGCGCGCCCAATGGGCAGCTTCCCTCGGCCTGCTGCCTCTGTTACTGA
CGCTGGGACTGCCGGTCAGCGCCAGCGGGCCTTTGGCCAATCTGATTGCCGTACCCTGGGTAAGCCTCACCGTTCCCTTC
GCGCTGCTCGGTACGTTGCTTCTGCCGTTGGGCGCTATCGGCGAGACGCTACTCTGGTTGGTCGGCTCCTCGCTGGCGCT
GCTGTTCGAGCTGCTGTCCGCCATGGCTACCTGGCAACCCGCCTGGCTGGCGGTCGGTATACCCATCTGGGCCTTGCTGA
TGATTGGGCTGGGTGTGCTGTTGATGTTATTGCCGTCAGGTGTGCCGGTGCGTGCGCTCGGACTGGTGCTCCTGGCGCCG
TTGGTGTATCCGCCGTATTCCGAAGTAGCCGAAGGACGGGCGCAGGTCTCGGTGCTGGATGTGGGGCAGGGGCTTTCGGT
ACTGGTGCGGACCCGGGAGCACGCGTTGCTCTACGATGCGGGACCGAGACAGGGTGATTTCGATACCGGCGAGCGTGTCG
TGTTCCCGTCGCTGCGAAGCCTGGGCGTGAAGAGGCTGGACATACTGCTGCTGAGCCATGCGGATAACGATCATTCCGGT
GGCGCTCAGGCGATCCGTCGACTGCTTCCGGTCGCGCGGACCGTCAGTGGGGAGCCGCAACGACATGCGACCGATCTAAA
TGCCAAGCCCTGTGAAAACGGTGCCGAGTGGCGGTGGAACGGCGTGCGTTTCAGTCTCTGGCAATGGCAGGCGGCCCGGG
AAAGCAATCAGACGTCATGCGTTCTGCTGGTCGAGGCCAATGGCGAACGGGTGCTGCTTACCGGCGATATCGATCAGGCC
GCGGAGCAGGCGTTGCTGCTCAGCGGAAAGGATGTAAAGGCGCAGTGGTTGCTATTGCCTCATCACGGCAGCCGCAGCTC
ATCGTCGGAACCATTCCTGCGAGCGGTGGAACCGAGCGCCGCGCTGATCTCGCGCAGCCTGCACAACGCTTTCGGTCATC
CTCATCCGACTGTGACCGCTCGCCTCGAAGCGTCCGCAATCGACGTTTACGACACCGCCTTGCACGGCGCGATCCGCATC
GATCTCGGCGATTTCTCGGTGGCGGAGATACAGCGTGCGGAACGTCGGTTCTGGCGGGAAAAATGA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (500-683)

• Competence protein (Competence) (201-464)

• Domain of unknown function (DUF4131) (DUF4131) (22-168)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	66.574	96.896	0.645
comA	Ralstonia pseudosolanacearum GMI1000	36.494	100	0.379