Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   I6I22_RS00470 Genome accession   NZ_CP066045
Coordinates   110469..110876 (-) Length   135 a.a.
NCBI ID   WP_003282729.1    Uniprot ID   -
Organism   Stutzerimonas stutzeri strain FDAARGOS_1065     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 105469..115876
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6I22_RS00450 (I6I22_00450) - 106430..107296 (-) 867 WP_101275430.1 CheR family methyltransferase -
  I6I22_RS00455 (I6I22_00455) - 107358..109406 (-) 2049 WP_014818753.1 methyl-accepting chemotaxis protein -
  I6I22_RS00460 (I6I22_00460) - 109482..110018 (-) 537 WP_023446068.1 chemotaxis protein CheW -
  I6I22_RS00465 (I6I22_00465) pilH 110060..110425 (-) 366 WP_003303135.1 twitching motility response regulator PilH -
  I6I22_RS00470 (I6I22_00470) pilG 110469..110876 (-) 408 WP_003282729.1 twitching motility response regulator PilG Regulator
  I6I22_RS00475 (I6I22_00475) gshB 111113..112063 (+) 951 WP_101275334.1 glutathione synthase -
  I6I22_RS00480 (I6I22_00480) - 112151..113044 (+) 894 WP_101275335.1 energy transducer TonB -
  I6I22_RS00485 (I6I22_00485) - 113111..113680 (+) 570 WP_044315557.1 YqgE/AlgH family protein -
  I6I22_RS00490 (I6I22_00490) ruvX 113677..114105 (+) 429 WP_003297208.1 Holliday junction resolvase RuvX -
  I6I22_RS00495 (I6I22_00495) pyrR 114128..114640 (+) 513 WP_023446072.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  I6I22_RS00500 (I6I22_00500) - 114688..115704 (+) 1017 WP_101275336.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14826.22 Da        Isoelectric Point: 7.2439

>NTDB_id=516737 I6I22_RS00470 WP_003282729.1 110469..110876(-) (pilG) [Stutzerimonas stutzeri strain FDAARGOS_1065]
MEQHSEGLKVMVIDDSKTIRRTAETLLKKVGCDVITAVDGFDALAKIADTHPRIIFVDIMMPRLDGYQTCALIKNNSSFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPDFAPVEQAS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=516737 I6I22_RS00470 WP_003282729.1 110469..110876(-) (pilG) [Stutzerimonas stutzeri strain FDAARGOS_1065]
ATGGAACAGCACTCCGAGGGCTTGAAGGTCATGGTGATCGACGATTCGAAAACGATTCGTCGCACTGCTGAAACCCTGCT
GAAGAAAGTAGGTTGCGATGTCATCACCGCTGTGGACGGTTTCGATGCGCTCGCCAAGATTGCGGATACTCATCCCCGCA
TCATCTTTGTCGATATTATGATGCCCAGGCTGGACGGTTATCAGACCTGTGCGTTGATCAAGAACAACAGTTCCTTCAAG
TCGACGCCGGTGATCATGCTGTCTTCCAAAGATGGCCTGTTCGACAAGGCCAAAGGGCGTATTGTCGGATCCGATCAATA
CCTTACCAAGCCGTTCAGCAAAGAAGAGCTGCTCGGTGCGATCAAGGCGCATGTCCCTGATTTCGCACCGGTGGAGCAAG
CATCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76

92.593

0.704
  vicR Streptococcus mutans UA159

42.857

93.333

0.4