Detailed information NTG0516737

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: KZO15_RS21050
• Genome accession: NZ_CP080070
• Coordinates: 4431530..4432555 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain 19SZHZ713Rt
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4426530..4437555

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KZO15_RS21030 (KZO15_20985)	metJ	4427591..4427908 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
KZO15_RS21035 (KZO15_20990)	yiiX	4428092..4428700 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
KZO15_RS21040 (KZO15_20995)	rpmE	4428761..4428973 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
KZO15_RS21045 (KZO15_21000)	priA	4429176..4431374 (+)	2199	WP_001300388.1	primosomal protein N'	Machinery gene
KZO15_RS21050 (KZO15_21005)	cytR	4431530..4432555 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
KZO15_RS21055 (KZO15_21010)	ftsN	4432647..4433606 (+)	960	WP_000068828.1	cell division protein FtsN	-
KZO15_RS21060 (KZO15_21015)	hslV	4433699..4434229 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
KZO15_RS21065 (KZO15_21020)	hslU	4434239..4435570 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
KZO15_RS21070 (KZO15_21025)	menA	4435637..4436563 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
KZO15_RS21075 (KZO15_21030)	rraA	4436656..4437141 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
KZO15_RS21080 (KZO15_21035)	zapB	4437226..4437471 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=516737 KZO15_RS21050 WP_000644904.1 4431530..4432555(+) (cytR) [Escherichia coli strain 19SZHZ713Rt]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=516737 KZO15_RS21050 WP_000644904.1 4431530..4432555(+) (cytR) [Escherichia coli strain 19SZHZ713Rt]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATTATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628