Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   I6I32_RS03930 Genome accession   NZ_CP066041
Coordinates   824628..825665 (-) Length   345 a.a.
NCBI ID   WP_000730772.1    Uniprot ID   A0A1X1GB13
Organism   Streptococcus oralis strain FDAARGOS_1075     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 819628..830665
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6I32_RS03905 (I6I32_03905) - 820522..821853 (-) 1332 WP_198464970.1 hemolysin family protein -
  I6I32_RS03910 (I6I32_03910) endA 821989..822813 (-) 825 WP_198464971.1 DNA/RNA non-specific endonuclease Machinery gene
  I6I32_RS03915 (I6I32_03915) - 822854..823048 (-) 195 WP_000739701.1 DNA-directed RNA polymerase subunit beta -
  I6I32_RS03920 (I6I32_03920) murA 823035..824318 (-) 1284 WP_000411918.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  I6I32_RS03925 (I6I32_03925) - 824342..824572 (-) 231 WP_002892633.1 DUF1146 family protein -
  I6I32_RS03930 (I6I32_03930) sepM 824628..825665 (-) 1038 WP_000730772.1 SepM family pheromone-processing serine protease Regulator
  I6I32_RS03935 (I6I32_03935) coaD 825649..826137 (-) 489 WP_198464972.1 pantetheine-phosphate adenylyltransferase -
  I6I32_RS03940 (I6I32_03940) rsmD 826127..826666 (-) 540 WP_198464973.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  I6I32_RS03945 (I6I32_03945) asnA 826731..827723 (-) 993 WP_061409759.1 aspartate--ammonia ligase -
  I6I32_RS03950 (I6I32_03950) - 827833..828516 (-) 684 WP_198464974.1 Bax inhibitor-1/YccA family protein -
  I6I32_RS03955 (I6I32_03955) - 828571..829311 (-) 741 WP_198464975.1 TrmH family RNA methyltransferase -
  I6I32_RS03960 (I6I32_03960) - 829345..829623 (+) 279 WP_001174620.1 acylphosphatase -
  I6I32_RS03965 (I6I32_03965) yidC 829701..830630 (+) 930 WP_198465066.1 membrane protein insertase YidC -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37539.74 Da        Isoelectric Point: 5.5304

>NTDB_id=516643 I6I32_RS03930 WP_000730772.1 824628..825665(-) (sepM) [Streptococcus oralis strain FDAARGOS_1075]
MKKKTRWPLYVILALVLTFLAFVVPLPYYIEVPGGAEDIRRVLKVNETEDTEAGAYQFVTVGIRHATLSHLVYAWLTPFT
DIRSAKETTGGSTDAEFMRINQFYMQTSQNMAKYQGLKTAGKDIELKYLGVYVLTVTDNSTFKGILNIADTVTAVNDKTF
DSSKDLVDYVNSQQLGDTVKVTYEEDGKVKSAEGKIITLENGKNGIGIGLIDRTEVTSDVPIRFSTAGIGGPSAGLMFSL
AIYTQIADPGLRNGRIVAGTGTIDRDGNVGDIGGIDKKVVAASRQGANIFFAPDNPVTEEAKKADPNAKSNYETALEAAK
TIKTEMKIVPVKTLQDAIDYLKNNP

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=516643 I6I32_RS03930 WP_000730772.1 824628..825665(-) (sepM) [Streptococcus oralis strain FDAARGOS_1075]
ATGAAGAAAAAAACTAGATGGCCCTTATATGTCATCCTAGCACTAGTATTGACTTTTTTAGCCTTTGTAGTACCTTTACC
TTACTACATAGAAGTTCCAGGTGGAGCGGAAGATATTCGTCGCGTTTTGAAAGTCAATGAAACAGAAGACACAGAAGCAG
GAGCTTACCAGTTTGTAACAGTCGGCATTCGACACGCAACCCTGTCGCATCTTGTCTATGCTTGGTTAACACCTTTCACA
GATATAAGAAGTGCCAAGGAGACTACGGGTGGCTCTACTGATGCAGAGTTTATGCGGATCAATCAATTCTACATGCAAAC
TTCTCAAAATATGGCCAAGTATCAAGGACTGAAGACAGCTGGTAAGGATATCGAACTCAAGTACTTGGGAGTTTATGTCT
TAACTGTGACGGATAATTCAACTTTTAAGGGTATTCTGAATATTGCAGATACTGTGACGGCTGTTAATGATAAGACCTTT
GATAGTTCCAAGGACTTGGTCGACTATGTCAATTCTCAACAATTAGGGGACACAGTCAAAGTAACCTATGAAGAAGACGG
AAAAGTCAAGTCTGCTGAAGGTAAAATTATCACTCTCGAAAACGGGAAAAACGGGATTGGGATTGGTTTGATTGACCGTA
CGGAAGTGACCAGTGACGTTCCAATTCGCTTTTCAACAGCTGGTATCGGCGGGCCAAGTGCCGGTCTCATGTTTAGTCTC
GCTATTTACACCCAGATAGCAGATCCAGGACTTCGGAATGGCCGCATCGTTGCGGGAACGGGAACTATTGATCGTGATGG
GAATGTTGGTGACATTGGTGGAATTGACAAAAAAGTGGTGGCAGCCTCTCGTCAGGGAGCCAACATCTTTTTTGCTCCTG
ACAATCCAGTCACCGAGGAAGCAAAAAAAGCAGATCCCAATGCGAAAAGCAATTATGAAACAGCCCTAGAAGCTGCTAAA
ACGATCAAAACAGAGATGAAAATCGTTCCCGTTAAGACTTTGCAGGATGCAATTGATTACCTTAAAAACAATCCCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A1X1GB13

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

59.942

99.13

0.594