Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   I6I32_RS00310 Genome accession   NZ_CP066041
Coordinates   60251..61060 (+) Length   269 a.a.
NCBI ID   WP_198464637.1    Uniprot ID   -
Organism   Streptococcus oralis strain FDAARGOS_1075     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 55251..66060
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6I32_RS00290 (I6I32_00290) pta 55907..56881 (+) 975 WP_000451583.1 phosphate acetyltransferase -
  I6I32_RS00295 (I6I32_00295) mutY 56964..58124 (+) 1161 WP_198464636.1 A/G-specific adenine glycosylase -
  I6I32_RS00300 (I6I32_00300) micA 58200..58907 (+) 708 WP_000722058.1 response regulator YycF Regulator
  I6I32_RS00305 (I6I32_00305) micB 58900..60249 (+) 1350 WP_000568720.1 cell wall metabolism sensor histidine kinase VicK Regulator
  I6I32_RS00310 (I6I32_00310) vicX 60251..61060 (+) 810 WP_198464637.1 MBL fold metallo-hydrolase Regulator
  I6I32_RS00315 (I6I32_00315) - 61146..61919 (+) 774 WP_198464638.1 potassium channel family protein -
  I6I32_RS00320 (I6I32_00320) - 61957..62304 (-) 348 WP_000434660.1 thioredoxin -
  I6I32_RS00325 (I6I32_00325) - 62416..64134 (-) 1719 WP_198464639.1 phospho-sugar mutase -
  I6I32_RS00330 (I6I32_00330) - 64545..65699 (+) 1155 WP_000722100.1 DUF5105 domain-containing protein -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 29893.94 Da        Isoelectric Point: 6.5929

>NTDB_id=516617 I6I32_RS00310 WP_198464637.1 60251..61060(+) (vicX) [Streptococcus oralis strain FDAARGOS_1075]
MGEKGFKYSILASGSSGNSFYLETPKKKILVDAGLSGKKITSLLAEINRKPEDLNAILITHEHSDHIHGVGVLARKYGMD
LYANEKTWQAMENSKYLGKVDSSQKHIFEMGKTKTFGDIDIESFGVSHDAAAPQFYRFMKDDKSFVMLTDTGYVSDRMAG
IVENADGYLIESNHDVEILRAGSYAWRLKQRILSDLGHLSNEDGAEAMIRAMGNRTKKIYLGHLSKENNIKELARMTMVN
QLAQADLGVGVDFKVYDTSPDTATPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=516617 I6I32_RS00310 WP_198464637.1 60251..61060(+) (vicX) [Streptococcus oralis strain FDAARGOS_1075]
ATGGGTGAAAAAGGCTTTAAATACAGTATTTTAGCATCAGGCTCCAGTGGAAATTCCTTTTATCTGGAAACCCCAAAAAA
GAAAATCCTAGTAGATGCAGGCTTATCTGGTAAGAAAATTACTAGCCTGCTAGCTGAAATCAATCGCAAACCTGAAGATC
TGAATGCGATTCTGATTACGCATGAGCACTCAGATCATATCCATGGGGTCGGTGTCTTGGCTCGCAAATATGGCATGGAT
CTTTACGCCAATGAAAAGACTTGGCAGGCTATGGAAAATAGCAAGTATCTTGGCAAGGTTGATTCTTCGCAAAAGCATAT
CTTTGAAATGGGCAAAACCAAAACCTTTGGCGATATCGACATTGAGAGTTTTGGGGTTAGTCATGATGCGGCAGCACCAC
AGTTTTACCGATTTATGAAAGACGACAAGAGTTTTGTCATGTTGACCGATACAGGTTATGTTAGTGATCGAATGGCAGGA
ATTGTCGAAAATGCGGACGGTTACCTCATTGAGTCCAATCATGATGTAGAGATTTTGCGAGCAGGATCTTACGCTTGGCG
TCTCAAACAGCGAATTCTATCAGATCTCGGTCACCTTTCTAACGAAGACGGTGCTGAGGCCATGATTCGTGCAATGGGAA
ATCGAACAAAGAAAATCTATCTTGGTCACTTGTCCAAAGAGAACAATATCAAGGAGCTGGCTCGTATGACTATGGTCAAT
CAGTTAGCCCAGGCTGATCTGGGAGTTGGAGTAGACTTTAAGGTTTATGATACCTCACCAGATACTGCAACTCCATTGAC
AGATATATAA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

76.952

100

0.77