Detailed information    

insolico Bioinformatically predicted

Overview


Name   micB   Type   Regulator
Locus tag   I6H77_RS08515 Genome accession   NZ_CP066021
Coordinates   1772911..1774260 (+) Length   449 a.a.
NCBI ID   WP_000568721.1    Uniprot ID   -
Organism   Streptococcus oralis strain FDAARGOS_1020     
Function   repress competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1767911..1779260
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6H77_RS08490 (I6H77_08490) - 1768164..1768982 (+) 819 WP_000799063.1 NAD kinase -
  I6H77_RS08495 (I6H77_08495) - 1768979..1769875 (+) 897 WP_001210025.1 RluA family pseudouridine synthase -
  I6H77_RS08500 (I6H77_08500) pta 1769919..1770893 (+) 975 WP_000451577.1 phosphate acetyltransferase -
  I6H77_RS08505 (I6H77_08505) mutY 1770976..1772154 (+) 1179 WP_000886126.1 A/G-specific adenine glycosylase -
  I6H77_RS08510 (I6H77_08510) micA 1772211..1772918 (+) 708 WP_000722058.1 response regulator YycF Regulator
  I6H77_RS08515 (I6H77_08515) micB 1772911..1774260 (+) 1350 WP_000568721.1 cell wall metabolism sensor histidine kinase VicK Regulator
  I6H77_RS08520 (I6H77_08520) vicX 1774262..1775071 (+) 810 WP_001290610.1 MBL fold metallo-hydrolase Regulator
  I6H77_RS08525 (I6H77_08525) - 1775179..1777050 (+) 1872 WP_000150976.1 Eco57I restriction-modification methylase domain-containing protein -

Sequence


Protein


Download         Length: 449 a.a.        Molecular weight: 51607.95 Da        Isoelectric Point: 4.5770

>NTDB_id=516497 I6H77_RS08515 WP_000568721.1 1772911..1774260(+) (micB) [Streptococcus oralis strain FDAARGOS_1020]
MIEDIRQTILTSDFIFILILLGFILVVTLLLLENRRDNIRLKEINQKVKDLIAGDYSQVLDLQGSTEITNITNNLNDLSE
VIRLTQENLEQESKRLNSILSYMTDGVLATNRRGQITMINDMAKKQLGVQKEDVLNKSILELLKIEDEYELRDLITQIPE
LTIDSQDVNGEYLSLRVRFALVRRESGFISGLVAVLHDTTEQEKEERERRLFVSNVSHELRTPLTSVKSYLEALDEGALY
DPVAPDFIKVSLDETNRMMRMVTDLLHLSRIDNTTSQLDVELINFTAFITFILNRFDKMRSQDDEKKYELVRDYPINSVW
IEIDTDKMTQVIDNILNNAIKYSPDGGKITVSMKTTDDQMILSIKDQGLGIPKQDLPKIFDRFYRVDRARSRAQGGTGLG
LAIAKEIIKQHNGFIWAKSEYGKGSTFTIVLPYDKDAVKEEIWEDEIED

Nucleotide


Download         Length: 1350 bp        

>NTDB_id=516497 I6H77_RS08515 WP_000568721.1 1772911..1774260(+) (micB) [Streptococcus oralis strain FDAARGOS_1020]
ATGATTGAAGATATTAGACAAACTATTCTGACCAGTGATTTTATCTTTATCTTGATTTTACTTGGCTTTATCCTGGTGGT
GACCTTGCTGTTACTGGAAAATCGTCGGGATAATATCCGTCTAAAGGAGATAAATCAAAAGGTTAAGGACTTGATTGCAG
GTGATTATTCTCAAGTTTTGGACTTGCAAGGAAGTACAGAAATCACCAATATCACCAATAATCTGAACGATTTGTCAGAA
GTTATTCGTTTGACCCAAGAAAATCTGGAACAAGAGAGTAAACGATTGAACAGTATTCTTTCTTACATGACAGATGGCGT
TCTTGCGACCAATCGCCGTGGCCAGATTACTATGATCAACGATATGGCCAAGAAACAGCTCGGTGTGCAGAAAGAAGATG
TTCTGAATAAAAGCATCCTCGAATTGCTTAAGATAGAAGATGAGTATGAGTTGCGTGACCTGATTACACAGATTCCTGAG
TTGACGATTGACTCCCAGGATGTGAATGGTGAATATCTAAGCCTTCGTGTACGTTTTGCTCTGGTTCGCCGTGAGTCAGG
TTTTATCTCTGGTTTGGTTGCCGTTTTACATGATACGACCGAACAGGAGAAGGAAGAGCGTGAGCGAAGACTCTTTGTTT
CTAACGTGAGTCACGAGTTGCGAACTCCTTTGACCAGTGTTAAATCTTATCTTGAAGCCTTGGACGAGGGAGCCCTGTAT
GATCCTGTTGCTCCTGATTTTATCAAGGTTTCACTCGATGAAACCAACCGTATGATGCGGATGGTGACAGATCTCTTGCA
TCTCTCTCGTATTGATAATACGACAAGTCAGCTAGATGTGGAATTGATTAATTTTACAGCATTCATCACCTTTATTCTCA
ACCGCTTTGATAAGATGAGAAGTCAGGATGACGAGAAAAAATATGAGCTTGTCAGAGATTACCCTATTAATTCAGTTTGG
ATCGAGATTGATACCGATAAGATGACTCAGGTGATTGATAATATTCTTAACAATGCCATTAAGTACTCACCAGATGGTGG
GAAAATCACTGTCAGCATGAAAACTACTGATGACCAGATGATTTTATCCATCAAAGACCAAGGTCTAGGTATTCCAAAGC
AAGATTTGCCTAAGATTTTTGACCGCTTCTACCGTGTGGATCGTGCAAGAAGCCGGGCTCAAGGTGGAACTGGTCTAGGT
CTGGCGATCGCAAAAGAAATCATCAAACAACACAATGGCTTTATATGGGCCAAAAGTGAATACGGTAAGGGCTCAACCTT
TACCATAGTGCTCCCTTATGATAAGGATGCCGTAAAAGAAGAAATATGGGAGGACGAAATAGAAGACTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  micB Streptococcus pneumoniae Cp1015

89.294

97.773

0.873

  vicK Streptococcus mutans UA159

70.896

89.532

0.635