Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   I6H77_RS05815 Genome accession   NZ_CP066021
Coordinates   1223700..1224431 (+) Length   243 a.a.
NCBI ID   WP_000889938.1    Uniprot ID   -
Organism   Streptococcus oralis strain FDAARGOS_1020     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1218700..1229431
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6H77_RS05790 (I6H77_05790) dnaK 1218712..1220535 (+) 1824 WP_000034683.1 molecular chaperone DnaK -
  I6H77_RS05795 (I6H77_05795) dnaJ 1220997..1222133 (+) 1137 WP_001066317.1 molecular chaperone DnaJ -
  I6H77_RS05800 (I6H77_05800) - 1222211..1222870 (-) 660 WP_000782734.1 hypothetical protein -
  I6H77_RS05805 (I6H77_05805) - 1222934..1223212 (-) 279 WP_000777741.1 hypothetical protein -
  I6H77_RS05810 (I6H77_05810) - 1223222..1223632 (-) 411 WP_001278311.1 HIT family protein -
  I6H77_RS05815 (I6H77_05815) pptA 1223700..1224431 (+) 732 WP_000889938.1 ABC transporter ATP-binding protein Regulator
  I6H77_RS05820 (I6H77_05820) pptB 1224428..1225477 (+) 1050 WP_000653781.1 ABC transporter permease Regulator
  I6H77_RS05825 (I6H77_05825) ccrZ 1225525..1226319 (+) 795 WP_000363020.1 cell cycle regulator CcrZ -
  I6H77_RS05830 (I6H77_05830) trmB 1226316..1226951 (+) 636 WP_001266088.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  I6H77_RS05835 (I6H77_05835) rimP 1227078..1227557 (+) 480 WP_000338695.1 ribosome maturation factor RimP -
  I6H77_RS05840 (I6H77_05840) nusA 1227600..1228736 (+) 1137 WP_000032277.1 transcription termination factor NusA -
  I6H77_RS05845 (I6H77_05845) rnpM 1228758..1229051 (+) 294 WP_000857560.1 RNase P modulator RnpM -
  I6H77_RS05850 (I6H77_05850) - 1229044..1229343 (+) 300 WP_001041395.1 YlxQ-related RNA-binding protein -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 27172.58 Da        Isoelectric Point: 4.7098

>NTDB_id=516485 I6H77_RS05815 WP_000889938.1 1223700..1224431(+) (pptA) [Streptococcus oralis strain FDAARGOS_1020]
MLEIKNLTGGYVHVPVLKDVSFTVESGQLVGLIGLNGAGKSTTINEIIGLLTPYSGEIKINGLTLREDATNYRKQIGYIP
ETPSLYEELTLREHIETVAMAYGIEQNVAFERVESLLKMFRLDQKLDWFPVHFSKGMKQKVMIICAFVVDPSLFIVDEPF
LGLDPLAISDLIQLLEVEKQKGKSILMSTHVLDSAEKMCDAFVILHKGEVRAQGNLQQLREAFGMPEASLNDIYLALTKE
EEL

Nucleotide


Download         Length: 732 bp        

>NTDB_id=516485 I6H77_RS05815 WP_000889938.1 1223700..1224431(+) (pptA) [Streptococcus oralis strain FDAARGOS_1020]
ATGTTAGAAATTAAAAACCTGACAGGAGGCTATGTTCACGTTCCTGTCTTGAAAGATGTGTCCTTTACAGTTGAAAGTGG
GCAGTTGGTCGGTTTGATTGGTCTCAACGGTGCTGGGAAATCAACGACTATCAATGAGATTATCGGTCTTTTGACACCTT
ACAGTGGGGAAATCAAGATTAATGGTTTGACACTGCGAGAAGATGCGACCAACTATCGCAAGCAGATTGGCTACATCCCA
GAAACGCCTAGCTTGTATGAAGAGCTGACTCTCAGAGAGCATATCGAAACGGTGGCTATGGCTTACGGTATTGAACAAAA
TGTGGCTTTTGAGCGAGTAGAATCTTTGTTAAAAATGTTTCGTTTGGATCAAAAATTAGATTGGTTTCCTGTGCATTTCT
CCAAAGGGATGAAGCAGAAGGTCATGATTATCTGTGCTTTTGTGGTGGATCCGAGTCTTTTCATCGTGGATGAGCCTTTT
CTTGGCCTCGATCCGCTGGCTATTTCTGACTTGATTCAGCTTTTGGAAGTAGAAAAGCAAAAAGGTAAGTCTATCCTCAT
GAGTACCCACGTGCTGGACTCGGCGGAGAAGATGTGTGACGCCTTTGTTATTCTCCACAAGGGGGAGGTGAGGGCTCAGG
GAAACCTCCAGCAACTGCGCGAAGCCTTTGGCATGCCTGAAGCGAGTTTGAATGATATTTACTTGGCTCTGACCAAAGAG
GAGGAGCTATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

73.029

99.177

0.724
  pptA Streptococcus thermophilus LMD-9

72.199

99.177

0.716