Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   I6H77_RS02940 Genome accession   NZ_CP066021
Coordinates   619367..620404 (-) Length   345 a.a.
NCBI ID   WP_000730772.1    Uniprot ID   A0A1X1GB13
Organism   Streptococcus oralis strain FDAARGOS_1020     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 614367..625404
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6H77_RS02915 (I6H77_02915) - 615261..616592 (-) 1332 WP_000390016.1 hemolysin family protein -
  I6H77_RS02920 (I6H77_02920) endA 616728..617552 (-) 825 WP_000359002.1 DNA/RNA non-specific endonuclease Machinery gene
  I6H77_RS02925 (I6H77_02925) - 617593..617787 (-) 195 WP_000739701.1 DNA-directed RNA polymerase subunit beta -
  I6H77_RS02930 (I6H77_02930) murA 617774..619057 (-) 1284 WP_000411908.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  I6H77_RS02935 (I6H77_02935) - 619081..619311 (-) 231 WP_002874202.1 DUF1146 family protein -
  I6H77_RS02940 (I6H77_02940) sepM 619367..620404 (-) 1038 WP_000730772.1 SepM family pheromone-processing serine protease Regulator
  I6H77_RS02945 (I6H77_02945) coaD 620388..620876 (-) 489 WP_001280719.1 pantetheine-phosphate adenylyltransferase -
  I6H77_RS02950 (I6H77_02950) rsmD 620866..621405 (-) 540 WP_002874201.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  I6H77_RS02955 (I6H77_02955) asnA 621470..622462 (-) 993 WP_000747998.1 aspartate--ammonia ligase -
  I6H77_RS02960 (I6H77_02960) - 622572..623255 (-) 684 WP_001076937.1 Bax inhibitor-1/YccA family protein -
  I6H77_RS02965 (I6H77_02965) - 623310..624050 (-) 741 WP_000152688.1 TrmH family RNA methyltransferase -
  I6H77_RS02970 (I6H77_02970) - 624084..624362 (+) 279 WP_001174620.1 acylphosphatase -
  I6H77_RS02975 (I6H77_02975) yidC 624440..625369 (+) 930 WP_002875438.1 membrane protein insertase YidC -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37539.74 Da        Isoelectric Point: 5.5304

>NTDB_id=516451 I6H77_RS02940 WP_000730772.1 619367..620404(-) (sepM) [Streptococcus oralis strain FDAARGOS_1020]
MKKKTRWPLYVILALVLTFLAFVVPLPYYIEVPGGAEDIRRVLKVNETEDTEAGAYQFVTVGIRHATLSHLVYAWLTPFT
DIRSAKETTGGSTDAEFMRINQFYMQTSQNMAKYQGLKTAGKDIELKYLGVYVLTVTDNSTFKGILNIADTVTAVNDKTF
DSSKDLVDYVNSQQLGDTVKVTYEEDGKVKSAEGKIITLENGKNGIGIGLIDRTEVTSDVPIRFSTAGIGGPSAGLMFSL
AIYTQIADPGLRNGRIVAGTGTIDRDGNVGDIGGIDKKVVAASRQGANIFFAPDNPVTEEAKKADPNAKSNYETALEAAK
TIKTEMKIVPVKTLQDAIDYLKNNP

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=516451 I6H77_RS02940 WP_000730772.1 619367..620404(-) (sepM) [Streptococcus oralis strain FDAARGOS_1020]
ATGAAGAAAAAAACTAGATGGCCCTTATATGTCATCCTAGCACTAGTATTGACTTTTTTAGCCTTTGTAGTACCTTTACC
TTACTACATAGAAGTTCCGGGTGGAGCGGAAGATATTCGTCGCGTTTTGAAAGTCAATGAAACAGAAGACACAGAAGCAG
GAGCTTACCAGTTTGTAACAGTCGGCATTCGACATGCAACCCTATCGCATCTTGTCTATGCTTGGTTAACACCTTTCACA
GATATTAGAAGTGCCAAGGAGACTACGGGTGGCTCTACTGATGCAGAATTTATGCGGATTAATCAGTTCTACATGCAAAC
TTCTCAAAACATGGCCAAGTATCAAGGATTGAAGACCGCTGGTAAGGATATTGAACTCAAGTATCTGGGAGTTTATGTCT
TGACCGTGACGGACAATTCAACTTTTAAGGGCATTCTGAACATAGCAGACACCGTGACGGCTGTTAATGACAAAACATTT
GACAGTTCAAAAGACTTGGTCGATTATGTTAATTCTCAACAATTAGGGGATACGGTCAAGGTAACCTATGAGGAAGACGG
AAAAGTCAAGTCTGCAGAAGGTAAAATTATCACTCTCGAAAACGGGAAAAACGGTATTGGGATTGGTTTGATTGACCGTA
CAGAAGTGACCAGTGACGTTCCAATTCGCTTTTCAACAGCTGGTATCGGCGGGCCAAGTGCCGGTCTCATGTTTAGCCTC
GCTATTTACACCCAGATAGCAGATCCAGGACTTCGTAATGGTCGCATCGTTGCGGGAACGGGAACTATTGATCGTGATGG
GAATGTTGGTGACATCGGTGGAATTGACAAAAAAGTGGTTGCAGCCTCTCGTCAGGGAGCCAACATCTTTTTTGCTCCTG
ACAATCCAGTCACCGAGGAAGCAAAAAAAGCAGATCCCAATGCGAAAAGTAACTATGAAACAGCCCTAGAAGCTGCTAAA
ACGATCAAAACGGAGATGAAAATCGTTCCGGTTAAGACCTTGCAGGATGCAATTGATTACCTTAAAAACAATCCCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A1X1GB13

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

59.942

99.13

0.594