Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   KW2_RS01260 Genome accession   NC_022369
Coordinates   246895..248676 (+) Length   593 a.a.
NCBI ID   WP_021036644.1    Uniprot ID   -
Organism   Lactococcus cremoris subsp. cremoris KW2     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 241895..253676
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KW2_RS01245 (kw2_0251) - 244017..245291 (-) 1275 WP_021036641.1 NAD(P)/FAD-dependent oxidoreductase -
  KW2_RS01250 (kw2_0252) - 245329..246156 (+) 828 WP_021036642.1 NAD(P)H-hydrate dehydratase -
  KW2_RS01255 (kw2_0253) - 246230..246643 (+) 414 WP_021036643.1 DUF1398 family protein -
  KW2_RS01260 (kw2_0254) rcrP 246895..248676 (+) 1782 WP_021036644.1 ABC transporter ATP-binding protein Regulator
  KW2_RS01265 (kw2_0255) rcrQ 248673..250571 (+) 1899 WP_021036645.1 ABC transporter ATP-binding protein Regulator
  KW2_RS01270 (kw2_0256) - 250662..251327 (+) 666 WP_021036646.1 YcjF family protein -
  KW2_RS01275 (kw2_0257) - 251374..252393 (-) 1020 WP_021036647.1 Gfo/Idh/MocA family oxidoreductase -
  KW2_RS12070 (kw2_0258) - 252377..252544 (-) 168 WP_011675293.1 hypothetical protein -
  KW2_RS01280 (kw2_0259) - 252743..253219 (-) 477 WP_011834348.1 S-ribosylhomocysteine lyase -

Sequence

Protein


Download         Length: 593 a.a.        Molecular weight: 66298.30 Da        Isoelectric Point: 7.5522

>NTDB_id=51639 KW2_RS01260 WP_021036644.1 246895..248676(+) (rcrP) [Lactococcus cremoris subsp. cremoris KW2]
MLTIGRRYLNFWPVFWALFLLVIQVVTNLWLPTITADIINKGIGQSDMKYIWFMGLIMLIVALASWISAIGNVYFASKQS
QGLGMKLRRDLFNKVLFMDERNFQDFGDATLITRTTNDVTQLQNVFQTMLRMMLMAPMMLIGSIFMAWKLSHDLMLVFLI
SLPILTLAVVINIAIAMPRFRSMQTKVDKINLIFQQGLTGVRVIRAFRRDQYEIDKFDEANRDLTHTSRVVLTTIAMLMP
IMTVILSFTNIGIVWFGAQLIGKDMMEMGSLVAFLTYASQILMSFMQLSAVAVMVPRAQVSAVRVREILERQDKITDEQV
NKELNESVSNSLALHQVSFKFDEAKRQALSDLSVNVKAGQTLAIIGGTGSGKSTILNLIARLIDPTSGSVNINGIDIRQM
SQHDLHEKVALTQQKAVLFSGSLRSNLQFGKSDATDEEMWQALEIAQAADFIREQGGLEMAVEQNGANFSGGQKQRIAIA
RTLIKEAEIYLFDDSFSALDFATDRKLREAINKSEKHHDKIKVIVAQRIATVMSADQILVLENGLAVGLGTHESLAKSCP
QYQETMQSQLSDEDLVKMGLSITNSTDKGGPVQ

Nucleotide


Download         Length: 1782 bp        

>NTDB_id=51639 KW2_RS01260 WP_021036644.1 246895..248676(+) (rcrP) [Lactococcus cremoris subsp. cremoris KW2]
ATGCTAACAATCGGCCGACGCTATTTGAATTTTTGGCCTGTTTTTTGGGCACTTTTTTTGCTTGTCATTCAAGTGGTGAC
TAATCTTTGGTTGCCAACAATTACAGCGGACATTATTAATAAAGGAATCGGTCAATCAGATATGAAATATATCTGGTTTA
TGGGTTTAATAATGCTAATCGTTGCCCTTGCTAGCTGGATTTCAGCGATTGGGAATGTTTATTTTGCTTCCAAACAATCG
CAAGGTTTGGGGATGAAATTACGTCGTGACTTATTTAATAAAGTATTATTTATGGATGAGCGTAATTTTCAAGATTTTGG
TGATGCAACTTTAATCACCCGGACAACAAATGACGTGACTCAACTGCAAAATGTTTTTCAGACGATGCTTCGGATGATGC
TTATGGCACCGATGATGTTGATTGGTTCAATCTTTATGGCTTGGAAATTATCACATGATTTGATGCTTGTTTTTTTAATT
TCTTTGCCTATTTTGACTTTGGCTGTGGTGATAAATATCGCCATTGCCATGCCCCGCTTTCGTTCAATGCAAACTAAAGT
TGATAAGATTAATCTCATCTTTCAACAAGGGCTGACTGGAGTAAGGGTGATTCGGGCTTTTAGGCGAGACCAATATGAAA
TTGATAAATTTGATGAAGCAAATCGAGATTTAACGCATACTAGCCGAGTAGTATTGACCACCATTGCCATGTTAATGCCA
ATCATGACCGTTATTTTGAGTTTTACAAATATCGGAATTGTCTGGTTTGGTGCACAACTCATCGGTAAAGATATGATGGA
AATGGGCTCATTGGTTGCCTTTTTGACTTATGCATCACAGATTTTGATGTCCTTTATGCAATTGTCGGCAGTCGCTGTTA
TGGTGCCCCGAGCTCAAGTTTCGGCTGTCCGCGTTCGAGAAATTTTAGAAAGACAAGACAAAATCACGGATGAGCAAGTT
AATAAGGAGCTAAATGAGTCTGTCAGTAATTCTTTAGCACTTCATCAGGTTTCATTCAAATTTGATGAGGCTAAAAGACA
AGCACTGTCAGATTTGTCAGTAAATGTGAAAGCTGGTCAAACTTTAGCGATTATTGGTGGGACAGGTTCTGGGAAATCAA
CGATTTTGAATTTGATTGCTAGATTGATTGACCCAACAAGTGGAAGTGTCAATATTAATGGGATTGATATTCGGCAAATG
TCTCAACATGATTTGCATGAGAAGGTCGCCTTAACTCAACAAAAAGCAGTTCTTTTTTCTGGAAGCCTGCGTTCTAATCT
ACAATTTGGGAAAAGTGATGCCACTGATGAAGAAATGTGGCAAGCTTTAGAAATTGCTCAAGCTGCAGATTTTATTCGAG
AACAAGGTGGTCTTGAGATGGCAGTGGAACAAAATGGTGCCAACTTTTCTGGTGGCCAAAAACAAAGAATTGCCATTGCT
CGAACATTGATTAAAGAGGCTGAAATTTATCTCTTTGATGACTCATTTTCTGCATTAGATTTCGCTACAGACCGGAAACT
TCGCGAGGCGATTAACAAGTCAGAAAAACATCATGATAAAATCAAAGTGATTGTCGCCCAAAGGATTGCCACAGTCATGT
CAGCTGACCAAATTTTAGTTTTGGAAAATGGACTTGCCGTGGGTCTTGGAACACATGAAAGTCTGGCCAAATCATGTCCG
CAATATCAAGAAACCATGCAATCACAACTCTCAGATGAGGATTTGGTGAAAATGGGTCTTTCGATTACAAATTCAACTGA
CAAAGGAGGGCCAGTCCAATGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(349-495)

ABC transporter transmembrane region (ABC_membrane)

(15-285)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

38.421

96.121

0.369

Multiple sequence alignment