Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   KW2_RS01265 Genome accession   NC_022369
Coordinates   248673..250571 (+) Length   632 a.a.
NCBI ID   WP_021036645.1    Uniprot ID   -
Organism   Lactococcus cremoris subsp. cremoris KW2     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 243673..255571
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KW2_RS01245 (kw2_0251) - 244017..245291 (-) 1275 WP_021036641.1 NAD(P)/FAD-dependent oxidoreductase -
  KW2_RS01250 (kw2_0252) - 245329..246156 (+) 828 WP_021036642.1 NAD(P)H-hydrate dehydratase -
  KW2_RS01255 (kw2_0253) - 246230..246643 (+) 414 WP_021036643.1 DUF1398 family protein -
  KW2_RS01260 (kw2_0254) rcrP 246895..248676 (+) 1782 WP_021036644.1 ABC transporter ATP-binding protein Regulator
  KW2_RS01265 (kw2_0255) rcrQ 248673..250571 (+) 1899 WP_021036645.1 ABC transporter ATP-binding protein Regulator
  KW2_RS01270 (kw2_0256) - 250662..251327 (+) 666 WP_021036646.1 YcjF family protein -
  KW2_RS01275 (kw2_0257) - 251374..252393 (-) 1020 WP_021036647.1 Gfo/Idh/MocA family oxidoreductase -
  KW2_RS12070 (kw2_0258) - 252377..252544 (-) 168 WP_011675293.1 hypothetical protein -
  KW2_RS01280 (kw2_0259) - 252743..253219 (-) 477 WP_011834348.1 S-ribosylhomocysteine lyase -
  KW2_RS01285 (kw2_0260) - 253437..253901 (+) 465 WP_021036648.1 GyrI-like domain-containing protein -
  KW2_RS01290 (kw2_0261) - 253968..254813 (+) 846 WP_011675296.1 aldo/keto reductase -
  KW2_RS01295 (kw2_0262) - 255053..255565 (+) 513 WP_021036649.1 cysteine hydrolase family protein -

Sequence

Protein


Download         Length: 632 a.a.        Molecular weight: 71264.14 Da        Isoelectric Point: 9.4559

>NTDB_id=51640 KW2_RS01265 WP_021036645.1 248673..250571(+) (rcrQ) [Lactococcus cremoris subsp. cremoris KW2]
MMRGNYLNRGGKGADRFQKGRRAENFFPTIIRLFKYMRRDLWGLIFSMVIAGLSVILSVQAPKILGTATTVIFDGVTKSL
KNHQAIRIDMAKVESILLYVLVIYLISFVSGVLQQSIMTRISQRTVYTLRREFKNKMKKLPISYYDSHNNGDIMSRMIND
MDNISGTLNQTLIQLITSILQFVGTIYFMLTISWQLALVAFITVPLAMITVRIVAPLSQKFFSEQQKNLGLLNDQIEENY
SGHTVIKTFNHEAAAEKEFARRNDDFYKSAWKAQFVSTLIYPTMRFINNLDYLAMAVIGGLKVISGSVNLGDVQAMLQYT
NQFAQPITNISNMLNTIQATVASAERIFEVLDEKEMTDGITDIEKVTDSKKKRTDESSKNSVSNLKATASPDFINFEQVA
FSYNENQTLMTDVNFSVEVGQMVAIVGPTGAGKTTMINLLERFYDVSSGKILLEGKDIRETKREQLRSRMAMVLQETWLF
SGTIMDNLRYGRLEATDDEVIQAAKMAHADEFITTLPQGYQTVLNETATNISQGQRQLLTIARAFVANPEILILDEATSS
VDTRTERLIQSAMNRLLKGRTSFVVAHRLSTIRDANQILVMDKGNIVETGNHESLLKQEGLYASLYNSQFAK

Nucleotide


Download         Length: 1899 bp        

>NTDB_id=51640 KW2_RS01265 WP_021036645.1 248673..250571(+) (rcrQ) [Lactococcus cremoris subsp. cremoris KW2]
ATGATGAGAGGAAATTATCTTAATCGTGGGGGGAAGGGAGCTGACCGTTTCCAAAAGGGACGGCGAGCTGAAAATTTCTT
TCCGACCATTATTCGTCTTTTTAAATATATGCGTCGCGATTTGTGGGGGTTGATATTTTCAATGGTAATTGCTGGTCTGT
CAGTCATCTTATCAGTTCAAGCCCCTAAAATCTTAGGGACGGCGACAACGGTGATTTTTGATGGAGTGACAAAAAGTCTA
AAAAATCATCAAGCTATTCGAATTGACATGGCAAAAGTTGAATCTATTTTGCTTTATGTCTTGGTCATTTATCTAATTTC
ATTTGTTTCTGGAGTCTTGCAACAAAGCATCATGACTCGAATTTCACAACGAACGGTTTATACTTTGCGCCGCGAATTTA
AAAATAAAATGAAAAAGTTGCCCATTTCTTATTATGATAGTCATAATAATGGTGATATCATGAGTCGAATGATTAATGAT
ATGGACAATATTTCGGGGACTTTAAACCAAACATTGATTCAACTGATTACAAGTATCCTGCAATTTGTAGGAACCATCTA
CTTCATGCTGACAATTTCTTGGCAGTTGGCACTAGTTGCCTTTATCACAGTTCCTTTAGCAATGATTACTGTCAGAATTG
TCGCTCCTTTATCGCAAAAATTCTTTTCTGAACAACAAAAGAATTTGGGCTTATTAAATGATCAAATTGAGGAAAATTAC
TCAGGGCACACGGTCATTAAAACTTTTAATCATGAAGCAGCAGCTGAAAAAGAATTTGCTAGAAGAAATGATGATTTTTA
TAAATCCGCATGGAAAGCACAATTTGTGTCTACTTTGATTTATCCAACCATGCGCTTTATCAATAATTTGGATTATTTAG
CCATGGCAGTGATTGGTGGGCTTAAAGTGATTTCAGGGTCAGTCAATCTCGGAGATGTTCAAGCCATGTTGCAATATACC
AATCAATTTGCGCAACCCATTACGAATATTTCTAACATGCTTAATACCATTCAAGCAACAGTCGCATCGGCTGAGCGTAT
TTTTGAAGTATTAGATGAAAAAGAAATGACTGATGGGATAACGGACATTGAAAAAGTTACTGACAGCAAGAAAAAAAGGA
CTGACGAAAGCTCAAAAAATTCTGTCAGCAACTTAAAAGCAACTGCTTCGCCTGATTTCATTAATTTTGAACAAGTTGCT
TTTTCTTACAATGAAAATCAAACACTGATGACAGATGTTAATTTTTCAGTTGAAGTCGGTCAGATGGTTGCCATTGTCGG
ACCAACTGGTGCTGGGAAAACAACCATGATTAATTTGCTAGAACGTTTTTACGATGTGAGCTCAGGGAAAATTTTACTTG
AAGGTAAAGACATTCGGGAAACAAAACGAGAACAATTGCGAAGTCGGATGGCAATGGTCTTGCAAGAAACATGGCTATTT
TCAGGAACAATCATGGATAACTTGCGTTATGGACGTCTTGAAGCGACAGATGATGAAGTGATTCAGGCCGCTAAAATGGC
CCATGCTGATGAGTTTATCACGACTTTACCTCAAGGTTATCAAACCGTCTTAAATGAAACGGCTACAAATATTTCTCAGG
GACAAAGACAGCTGTTAACCATTGCGCGTGCTTTTGTGGCAAATCCCGAGATATTAATTTTGGACGAGGCAACCTCAAGT
GTAGATACAAGAACTGAGCGCTTGATTCAATCGGCAATGAATCGTTTGCTCAAAGGGCGGACAAGTTTTGTTGTGGCGCA
CCGTTTATCGACCATTCGTGATGCTAATCAGATTTTGGTCATGGACAAGGGAAATATTGTAGAAACAGGCAATCATGAAA
GTCTACTAAAACAAGAAGGACTTTATGCAAGTTTGTACAATTCACAATTTGCAAAATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(411-559)

ABC transporter transmembrane region (ABC_membrane)

(44-326)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

40.167

94.937

0.381

Multiple sequence alignment