Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   KW2_RS00380 Genome accession   NC_022369
Coordinates   73790..74575 (-) Length   261 a.a.
NCBI ID   WP_021036534.1    Uniprot ID   -
Organism   Lactococcus cremoris subsp. cremoris KW2     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 68790..79575
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KW2_RS00355 (kw2_0070) - 69577..70167 (+) 591 WP_021036531.1 flavin reductase family protein -
  KW2_RS00360 (kw2_0071) rpmG 70249..70398 (-) 150 WP_003132258.1 50S ribosomal protein L33 -
  KW2_RS00365 (kw2_0072) rpmF 70428..70601 (-) 174 WP_010905107.1 50S ribosomal protein L32 -
  KW2_RS00370 (kw2_0073) - 70964..72745 (+) 1782 WP_021036532.1 heavy metal translocating P-type ATPase -
  KW2_RS00375 (kw2_0074) - 72932..73780 (+) 849 WP_021036533.1 hypothetical protein -
  KW2_RS00380 (kw2_0075) spo0J 73790..74575 (-) 786 WP_021036534.1 ParB/RepB/Spo0J family partition protein Regulator
  KW2_RS00385 (kw2_0076) rarA 74630..75889 (-) 1260 WP_011834203.1 replication-associated recombination protein A Machinery gene
  KW2_RS00390 (kw2_0077) - 75933..76421 (-) 489 WP_021036535.1 GNAT family N-acetyltransferase -
  KW2_RS00395 (kw2_0078) - 76594..77061 (+) 468 WP_011675148.1 DUF3013 family protein -
  KW2_RS00400 (kw2_0079) - 77091..78644 (+) 1554 WP_021036536.1 ABC-F family ATP-binding cassette domain-containing protein -
  KW2_RS00405 (kw2_0080) - 78719..79003 (+) 285 WP_014571838.1 hypothetical protein -

Sequence

Protein


Download         Length: 261 a.a.        Molecular weight: 29850.50 Da        Isoelectric Point: 6.9995

>NTDB_id=51635 KW2_RS00380 WP_021036534.1 73790..74575(-) (spo0J) [Lactococcus cremoris subsp. cremoris KW2]
MTEEITQLKLSTIVKNPYQPRLVFDEDRLRELANSIKENGVLQPIIVRKSKLIGYELLAGERRFQASKLAGLETIPAIIR
TYSDEEMMTLSILENLQRENLNPLEESKSLAQLSDKLGMTHDEIAKALGKSRSYVSNLIRLLGLPDEILKHVENRTLSPA
HARTLLAEKNPKKQLELVDKIINEQLNVRELEAIIYGEEKVTDKSVSNSNINLFTDETEKELMKKLGNKVKIQANKKYQG
KLSLHFDNLDELEHLIELLKK

Nucleotide


Download         Length: 786 bp        

>NTDB_id=51635 KW2_RS00380 WP_021036534.1 73790..74575(-) (spo0J) [Lactococcus cremoris subsp. cremoris KW2]
ATGACAGAAGAAATCACTCAACTCAAATTATCAACAATTGTCAAAAACCCCTATCAGCCTCGTCTTGTTTTTGATGAGGA
TCGCTTAAGAGAGCTGGCCAATTCTATCAAAGAAAATGGTGTTCTACAGCCGATTATTGTTCGTAAATCGAAGTTAATTG
GTTATGAATTATTGGCAGGCGAACGTCGTTTTCAAGCTTCAAAATTAGCTGGATTAGAAACAATCCCAGCAATTATTCGG
ACCTACTCGGATGAGGAGATGATGACTCTATCGATTTTGGAAAATTTACAGAGGGAAAATCTCAACCCTTTAGAAGAATC
TAAAAGTCTTGCACAACTCTCTGACAAATTAGGCATGACTCATGATGAAATCGCTAAGGCCCTCGGAAAATCAAGATCTT
ATGTTTCTAATTTGATTCGTTTGCTTGGTCTACCCGATGAAATTTTGAAGCATGTTGAGAATAGAACTCTTTCCCCTGCT
CATGCCCGAACGCTCTTAGCCGAAAAAAATCCCAAAAAGCAATTAGAATTGGTCGATAAAATCATCAACGAACAGCTCAA
TGTTAGGGAGCTTGAAGCTATTATTTATGGCGAAGAAAAAGTTACTGACAAGTCTGTCAGTAACTCAAATATCAATCTTT
TTACTGACGAAACTGAAAAAGAACTGATGAAAAAGTTGGGAAATAAAGTTAAAATTCAAGCAAATAAAAAATATCAAGGA
AAGTTATCGCTCCATTTTGATAATCTTGATGAGCTTGAACATTTGATTGAATTGCTCAAAAAATAA

Domains

Predicted by InterProScan.

ParB/Sulfiredoxin domain (ParB_N)

(7-95)

HTH domain found in ParB protein (HTH_ParB)

(146-195)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

46.875

98.084

0.46

Multiple sequence alignment