Detailed information    

insolico Bioinformatically predicted

Overview


Name   comEC/celB   Type   Machinery gene
Locus tag   I6H76_RS02770 Genome accession   NZ_CP065994
Coordinates   556076..558310 (-) Length   744 a.a.
NCBI ID   WP_174221233.1    Uniprot ID   -
Organism   Streptococcus infantarius strain FDAARGOS_1019     
Function   ssDNA transport into the cell (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 551076..563310
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6H76_RS02740 (I6H76_02740) - 551972..552697 (-) 726 WP_043878303.1 YebC/PmpR family DNA-binding transcriptional regulator -
  I6H76_RS02745 (I6H76_02745) sodA 552802..553413 (-) 612 WP_006531489.1 superoxide dismutase SodA -
  I6H76_RS02750 (I6H76_02750) holA 553509..554546 (-) 1038 WP_006531490.1 DNA polymerase III subunit delta -
  I6H76_RS02755 (I6H76_02755) - 554598..554750 (-) 153 WP_006531491.1 hypothetical protein -
  I6H76_RS02760 (I6H76_02760) - 554877..555314 (-) 438 WP_223903590.1 hypothetical protein -
  I6H76_RS02765 (I6H76_02765) - 555377..555904 (-) 528 WP_006531493.1 HD family hydrolase -
  I6H76_RS02770 (I6H76_02770) comEC/celB 556076..558310 (-) 2235 WP_174221233.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  I6H76_RS02775 (I6H76_02775) - 558300..558980 (-) 681 WP_006531495.1 helix-hairpin-helix domain-containing protein -
  I6H76_RS02780 (I6H76_02780) - 559078..559824 (-) 747 WP_014334451.1 1-acyl-sn-glycerol-3-phosphate acyltransferase -
  I6H76_RS02785 (I6H76_02785) - 559932..560693 (+) 762 WP_006531497.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  I6H76_RS02790 (I6H76_02790) - 560668..560943 (+) 276 WP_006531499.1 GIY-YIG nuclease family protein -
  I6H76_RS02795 (I6H76_02795) - 560983..562584 (-) 1602 WP_006531501.1 DEAD/DEAH box helicase -

Sequence


Protein


Download         Length: 744 a.a.        Molecular weight: 84337.01 Da        Isoelectric Point: 8.8613

>NTDB_id=516112 I6H76_RS02770 WP_174221233.1 556076..558310(-) (comEC/celB) [Streptococcus infantarius strain FDAARGOS_1019]
MLIKYLPIKPIQLAFLLTLLYYFCFEKVVLCLILLLLALLFLWQQYGWKAWCQVSLCLAFFAIFFLTKANQTEQVYQAAP
AHLTKIQMIPDTISVNGDLLSFRGKEAGQIYQVFYTLKSEKKQEFFKNLNQTMFLSGQVDLEEATPQRNFGGFDYRTYLK
HEGIYRIANLSSITEMRQQSSLSFFERLHELRRQAIVSIQRNFPAPIQHYMTGLLFGYLDKSFDEMSDVYTSLGIIHLFA
LSGMQVGFFVALFRFIILRLGLRRDYVDILQIPFSLVYAGLTGFSVSVVRSLVQSAFANLGIKKLDNLAYTLMTLFILMP
NFLLTTGGILSFTYAFILSFIDFDELSHYRKILTECLAISLGSLPVLLYFFSVFQPLSLLLTAIFSLAFDTLILPVLTFV
FLLSPLVKITALNPFFVFLETIIKFSKSLVGTPLVFGRPSLGILLLLLLTIGLLYDCYQRKKVAIFLLSLIALLFFQIKH
PLENEVTVVDIGQGDSIFVRDVKGHTLLIDVGGKVSFSEKKSWQKRLADSNAERTLIPYLKSRGIGKIDQLVLTHTDTDH
MGDMLEVAKELKIGQVLVSPGSLTKPDFVVKLRQMKTPVRAVFAGDNLPIMGSHLQVLYPIEVGDGSNNDSVVLYGKLLG
KNFLFTGDLEEEGEQQMIATYPNLPVDVLKAGHHGSKGSSSPEFLEHISPQVVLISAGQNNRYKHPHQETLERFQAQNMT
IYRTDEQGAIRFRGLKTWHIETVR

Nucleotide


Download         Length: 2235 bp        

>NTDB_id=516112 I6H76_RS02770 WP_174221233.1 556076..558310(-) (comEC/celB) [Streptococcus infantarius strain FDAARGOS_1019]
CTGTTGATTAAGTATCTTCCCATTAAGCCAATTCAATTGGCTTTTTTGCTCACTTTACTTTATTATTTTTGTTTTGAAAA
AGTGGTGTTATGTCTGATTTTACTCCTGTTAGCCTTGCTGTTTTTATGGCAACAGTATGGTTGGAAGGCTTGGTGTCAGG
TTTCACTGTGCTTGGCTTTCTTTGCGATATTTTTCCTGACTAAGGCTAATCAGACAGAACAGGTTTATCAAGCGGCGCCA
GCTCATTTAACAAAAATCCAGATGATTCCTGATACGATTTCGGTTAATGGTGATTTATTATCCTTTCGAGGTAAGGAAGC
TGGGCAGATTTACCAAGTTTTTTATACCTTGAAGTCAGAAAAAAAGCAGGAATTTTTTAAAAATCTTAATCAAACAATGT
TTTTATCAGGGCAGGTGGATTTAGAAGAGGCAACGCCACAGCGGAATTTTGGTGGTTTTGATTACCGCACTTACCTTAAA
CATGAAGGCATTTATCGGATTGCTAATCTTTCTTCGATTACTGAAATGAGACAGCAGAGCTCTTTAAGTTTTTTTGAACG
ACTACATGAACTTAGAAGACAGGCGATTGTCAGTATTCAAAGGAATTTTCCTGCTCCCATCCAACATTACATGACTGGCC
TTTTGTTTGGATATTTGGATAAGTCTTTTGATGAGATGAGTGATGTATACACGAGTTTAGGGATTATTCATCTTTTTGCT
CTGTCTGGTATGCAGGTAGGCTTTTTTGTGGCACTTTTTCGTTTTATTATTTTACGTCTTGGGTTACGGCGAGATTATGT
GGATATACTGCAAATCCCGTTTTCACTTGTATATGCTGGCTTGACAGGCTTTTCGGTATCAGTTGTTCGGAGCCTTGTTC
AGTCTGCTTTTGCAAATCTTGGCATAAAAAAATTAGATAATCTTGCCTATACTTTAATGACCCTTTTTATTTTGATGCCA
AATTTTCTACTGACGACGGGAGGCATTCTTTCGTTTACTTACGCTTTTATCCTGAGTTTTATTGATTTCGATGAGCTTAG
TCATTATCGAAAAATCCTTACAGAATGTTTGGCGATTTCGCTGGGAAGTTTACCGGTTTTGCTATATTTCTTCTCAGTAT
TTCAACCCTTGTCGCTGCTTTTAACAGCTATTTTTTCACTGGCTTTTGATACGCTTATCTTACCTGTTTTGACCTTTGTT
TTTCTTTTATCACCTCTGGTTAAAATTACCGCGTTAAATCCATTTTTTGTTTTTCTAGAAACTATCATCAAATTTAGCAA
GTCGCTGGTTGGTACCCCACTCGTTTTTGGCAGACCAAGTCTAGGAATTTTGTTGTTATTACTTTTGACAATAGGGCTTC
TCTATGACTGTTATCAACGTAAAAAAGTGGCCATTTTCCTTCTTAGCTTAATAGCTCTGCTATTTTTCCAAATCAAGCAT
CCGCTGGAAAACGAAGTGACGGTGGTTGACATTGGGCAGGGAGATAGTATTTTTGTGCGTGATGTTAAAGGGCATACGCT
GTTAATTGATGTCGGAGGAAAAGTGAGTTTTAGTGAGAAAAAATCGTGGCAAAAGCGCTTAGCTGATAGCAATGCTGAGC
GGACACTGATTCCTTATCTGAAAAGTCGAGGAATTGGTAAAATTGACCAGTTGGTTTTGACGCACACGGATACTGACCAT
ATGGGTGATATGCTGGAAGTTGCAAAAGAGCTGAAAATTGGTCAAGTCCTGGTGAGTCCAGGAAGTCTCACAAAGCCAGA
TTTTGTGGTTAAACTTCGACAAATGAAGACGCCAGTTCGCGCAGTTTTTGCAGGAGATAACTTGCCAATTATGGGAAGTC
ACTTGCAGGTGCTCTATCCAATTGAAGTTGGTGATGGTTCTAATAATGATTCGGTGGTGTTATATGGCAAGCTTTTAGGT
AAAAATTTTTTGTTTACAGGAGATTTGGAAGAAGAGGGCGAGCAACAGATGATAGCAACTTATCCCAATCTGCCAGTTGA
TGTTTTAAAAGCAGGACACCATGGTTCAAAAGGTTCATCAAGCCCAGAATTTCTAGAGCATATTTCACCGCAAGTTGTTC
TGATTTCCGCAGGACAAAATAACCGCTACAAGCATCCTCATCAAGAAACGCTTGAACGCTTTCAAGCACAAAACATGACT
ATTTACCGTACTGATGAACAAGGTGCTATCCGCTTTAGAGGGCTGAAAACTTGGCACATTGAAACAGTGAGGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEC/celB Streptococcus mitis NCTC 12261

50.674

99.731

0.505

  comEC/celB Streptococcus mitis SK321

50.27

99.731

0.501

  comEC/celB Streptococcus pneumoniae TIGR4

49.798

99.866

0.497

  comEC/celB Streptococcus pneumoniae Rx1

49.394

99.866

0.493

  comEC/celB Streptococcus pneumoniae D39

49.394

99.866

0.493

  comEC/celB Streptococcus pneumoniae R6

49.394

99.866

0.493

  comEC Lactococcus lactis subsp. cremoris KW2

46.729

100

0.47