Detailed information NTG0515751

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: KZH43_RS10185
• Genome accession: NZ_CP079923
• Coordinates: 2013971..2015068 (+)
• Length: 365 a.a.
• NCBI ID: WP_000266662.1
• Uniprot ID: Q8DMX3
• Organism: Streptococcus pneumoniae strain Rx1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2008971..2020068

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KZH43_RS10160 (KZH43_10155)	pgsA	2009492..2010037 (-)	546	WP_000712132.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
KZH43_RS10165 (KZH43_10160)	rodZ	2010048..2010869 (-)	822	WP_001227958.1	cytoskeleton protein RodZ	-
KZH43_RS10170 (KZH43_10165)	yfmH	2010911..2012194 (-)	1284	WP_000170194.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
KZH43_RS10175 (KZH43_10170)	yfmF	2012191..2013441 (-)	1251	WP_000424263.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
KZH43_RS10180 (KZH43_10175)	yaaA	2013600..2013968 (+)	369	WP_000455903.1	S4 domain-containing protein YaaA	-
KZH43_RS10185 (KZH43_10180)	recF	2013971..2015068 (+)	1098	WP_000266662.1	DNA replication/repair protein RecF	Machinery gene
KZH43_RS10190 (KZH43_10185)	guaB	2015119..2016597 (-)	1479	WP_000073428.1	IMP dehydrogenase	-
KZH43_RS10195 (KZH43_10190)	trpS	2016749..2017774 (-)	1026	WP_000165444.1	tryptophan--tRNA ligase	-
KZH43_RS10200 (KZH43_10195)	-	2017980..2019602 (+)	1623	WP_000958770.1	ATP-binding cassette domain-containing protein	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41916.00 Da
• Isoelectric Point: 9.0596

>NTDB_id=515751 KZH43_RS10185 WP_000266662.1 2013971..2015068(+) (recF) [Streptococcus pneumoniae strain Rx1]
MWLQHLSLKTFRNYKETKIDFNPKLNVFLGRNAQGKTNMLEAIYFLALTRSHRTRTDKNLIHFDEEQLHLSGLVQKKTGS
IPLEIELTQKGRVTKVNHLKQARLSDYVGHMNVVLFAPEDLQLIKGAPSIRRKFIDMELGQIKPIYLSDLTNYNHILKQR
NTYLKSAQKIDETFLSVLDDQLVDYGCRVMNHRLDFIKKLESFGRKKHFELSNQIEELSISYQSSVNITDKQNLSESFKI
ALEKSRSRDLFKKNTGVGPHRDDISFYINGMDASFGSQGQHRSLVLSIKLAEIELMESITTESPILLLDDVMSELDNTRQ
LKLLETISQSIQTFITTTSLDHLQNLPENLSIFTIQDGKASVNGN

Nucleotide

• Length: 1098 bp

>NTDB_id=515751 KZH43_RS10185 WP_000266662.1 2013971..2015068(+) (recF) [Streptococcus pneumoniae strain Rx1]
ATGTGGCTACAACATCTATCTCTCAAGACTTTTCGTAATTACAAAGAAACGAAAATAGACTTTAATCCTAAATTGAATGT
CTTTTTGGGACGTAATGCACAAGGAAAAACAAACATGTTAGAGGCTATCTATTTTTTAGCCTTAACGCGTAGTCATCGAA
CTCGAACAGATAAAAATCTCATTCATTTTGATGAGGAACAACTTCATCTTTCAGGTCTCGTTCAGAAAAAAACTGGATCC
ATTCCCCTAGAAATCGAACTAACACAAAAAGGCCGTGTAACAAAAGTTAATCACTTAAAACAGGCACGCCTTTCAGATTA
TGTAGGACACATGAATGTTGTCTTATTTGCTCCTGAAGATTTACAACTAATTAAAGGAGCACCTTCGATTCGACGAAAAT
TCATTGATATGGAACTTGGGCAAATTAAGCCAATCTATTTATCTGACTTAACCAATTATAACCACATCCTAAAGCAAAGA
AACACTTACCTAAAATCAGCTCAAAAAATAGATGAAACATTCCTTTCTGTGTTAGATGATCAGCTAGTTGATTATGGATG
TCGTGTAATGAATCACCGCTTAGATTTCATAAAAAAACTAGAATCATTTGGGCGTAAGAAACATTTTGAACTCTCTAATC
AGATCGAAGAGTTGTCAATATCCTATCAATCTTCTGTCAATATAACTGACAAACAAAACTTATCCGAATCTTTCAAAATT
GCTTTAGAAAAAAGTAGATCCAGAGATTTATTTAAAAAGAATACTGGTGTCGGTCCTCATCGAGATGACATTTCTTTTTA
TATAAATGGGATGGATGCTAGTTTCGGAAGCCAAGGTCAACATCGTAGTCTCGTCCTCTCGATAAAATTAGCAGAAATCG
AATTAATGGAAAGCATTACCACAGAATCTCCTATATTACTGCTTGACGATGTGATGAGTGAACTTGACAACACTAGACAG
TTAAAATTATTAGAAACGATTTCTCAATCAATCCAAACCTTTATCACAACAACAAGCTTAGACCATCTTCAAAATCTGCC
AGAAAATCTAAGTATCTTCACTATTCAGGATGGTAAAGCTTCTGTAAATGGAAATTGA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

3D structure

• AlphaFold DB: Q8DMX3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	100	100	1
recF	Bacillus subtilis subsp. subtilis str. 168	45.902	100	0.46