Detailed information NTG0051489

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: HIFGL_RS06130
• Genome accession: NC_022356
• Coordinates: 1272127..1273467 (-)
• Length: 446 a.a.
• NCBI ID: WP_021035303.1
• Uniprot ID: -
• Organism: Haemophilus influenzae KR494
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1267127..1278467

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HIFGL_RS06110 (HifGL_001256)	-	1267461..1268981 (-)	1521	WP_021035299.1	Na+/H+ antiporter NhaC family protein	-
HIFGL_RS06115 (HifGL_001257)	-	1269432..1269836 (+)	405	WP_021035300.1	H-NS family nucleoid-associated regulatory protein	-
HIFGL_RS06120 (HifGL_001258)	purU	1269907..1270743 (+)	837	WP_021035301.1	formyltetrahydrofolate deformylase	-
HIFGL_RS06125 (HifGL_001259)	aroA	1270743..1272041 (+)	1299	WP_021035302.1	3-phosphoshikimate 1-carboxyvinyltransferase	-
HIFGL_RS06130 (HifGL_001260)	rarA	1272127..1273467 (-)	1341	WP_021035303.1	replication-associated recombination protein A	Machinery gene
HIFGL_RS06135 (HifGL_001261)	lolA	1273528..1274145 (-)	618	WP_021035304.1	outer membrane lipoprotein chaperone LolA	-
HIFGL_RS06140 (HifGL_001262)	-	1274163..1276922 (-)	2760	WP_021035305.1	DNA translocase FtsK	-
HIFGL_RS06145 (HifGL_001263)	lrp	1276924..1277403 (-)	480	WP_005653255.1	leucine-responsive transcriptional regulator Lrp	-

Sequence

Protein

• Length: 446 a.a.
• Molecular weight: 50236.11 Da
• Isoelectric Point: 6.7098

>NTDB_id=51489 HIFGL_RS06130 WP_021035303.1 1272127..1273467(-) (rarA) [Haemophilus influenzae KR494]
MSNLNFDFAENDFRPLAARMRPTSLEQYFGQSHLIGEGKPLRKAIQAGHIHSMILWGPPGTGKTTLAEIIAQRINAEVER
ISAVTSGIKEIREAIDRAKQNRLADRKTILFVDEVHRFNKSQQDAFLPHIEDGTVIFIGATTENPSFELNNALLSRARVY
VLKSLTTAEIEQVLQQAVEDPKRGLGKERLILEENLLQVLAEYVNGDARLALNCLELMVDMADETENGKKIDRTLLKEVL
GERQARFDKQGDRFYDLISALHKSVRGSAPDAALYWYARILTAGGDPLYVVRRLLAIASEDVGNADPRAMQVALAAWDCF
TRVGAYEGERAIAQAIIYLAVAPKSNAVYTAFNTAKQQAKDLPDYDVPPHLRNAPTNLMKELGYGAEYRYAHDEPNAYAA
GENYFPSELKDTQYYFPTNRGMEIQIKEKLERLREQDKSAVKKRYK

Nucleotide

• Length: 1341 bp

>NTDB_id=51489 HIFGL_RS06130 WP_021035303.1 1272127..1273467(-) (rarA) [Haemophilus influenzae KR494]
ATGTCGAACCTCAATTTTGATTTTGCCGAAAATGATTTTCGCCCACTGGCGGCAAGAATGCGTCCAACGAGTCTAGAGCA
GTATTTTGGGCAAAGCCATTTAATTGGCGAGGGCAAACCACTGCGAAAAGCGATTCAAGCTGGACATATTCATTCAATGA
TTTTGTGGGGGCCACCAGGTACGGGAAAAACGACCCTTGCAGAAATTATTGCGCAACGTATTAATGCAGAAGTAGAGCGA
ATTTCTGCAGTGACGAGTGGTATCAAAGAAATTAGAGAAGCGATTGATCGTGCAAAACAAAATCGTCTTGCAGATCGTAA
AACTATCTTGTTTGTGGATGAAGTCCATCGTTTTAATAAAAGCCAGCAAGATGCATTTTTACCACACATTGAAGACGGAA
CGGTTATTTTTATTGGGGCGACAACAGAAAATCCCTCTTTTGAGCTAAATAATGCGTTGCTTTCTCGTGCGCGAGTGTAT
GTACTGAAATCACTTACGACGGCTGAAATTGAACAAGTTTTGCAGCAAGCTGTAGAAGATCCTAAACGTGGATTGGGTAA
AGAGCGGTTAATTTTAGAAGAGAATTTACTGCAAGTGCTTGCCGAATATGTTAATGGGGATGCTCGATTAGCCTTGAATT
GTCTCGAATTAATGGTGGATATGGCAGATGAAACCGAAAATGGAAAGAAAATTGACCGCACTTTATTAAAAGAAGTCTTA
GGTGAACGCCAAGCGAGATTTGATAAACAAGGCGATCGTTTCTATGATTTAATTTCTGCGCTACATAAATCTGTCCGAGG
TTCTGCTCCAGATGCTGCGCTGTATTGGTATGCAAGAATTTTAACGGCAGGTGGAGATCCTCTATATGTCGTGCGTCGAT
TACTTGCCATTGCTTCAGAAGATGTGGGAAATGCAGATCCTCGCGCTATGCAAGTTGCATTGGCTGCTTGGGATTGCTTT
ACTCGAGTGGGGGCTTATGAAGGGGAGCGTGCCATTGCCCAAGCCATCATTTATCTTGCGGTTGCTCCAAAAAGTAATGC
AGTTTATACGGCGTTTAATACTGCAAAACAGCAAGCGAAAGATTTACCCGATTACGATGTTCCCCCACATTTACGCAATG
CGCCGACTAATTTAATGAAAGAGCTTGGCTATGGTGCTGAATATCGTTATGCCCACGATGAACCTAACGCTTATGCGGCA
GGCGAAAATTATTTCCCATCAGAATTAAAAGATACTCAATATTATTTTCCGACGAATAGAGGTATGGAAATTCAGATTAA
GGAAAAACTAGAACGTTTACGTGAGCAAGATAAAAGTGCGGTGAAAAAACGGTATAAATAA

Domains

Predicted by InterProScan.

• ATPase family associated with various cellular activities (AAA) (AAA) (53-159)

• MgsA AAA+ ATPase C terminal (MgsA_C) (267-433)

• AAA C-terminal domain (AAA_assoc_2) (188-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	39.243	94.843	0.372