Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   I8N76_RS17645 Genome accession   NZ_CP065831
Coordinates   3520456..3521052 (-) Length   198 a.a.
NCBI ID   WP_004179217.1    Uniprot ID   A0A085DH59
Organism   Klebsiella pneumoniae strain KpC11     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 3515456..3526052
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I8N76_RS17630 (I8N76_17630) helD 3515664..3517718 (-) 2055 WP_009485779.1 DNA helicase IV -
  I8N76_RS17635 (I8N76_17635) - 3517843..3518289 (+) 447 WP_002898425.1 YccF domain-containing protein -
  I8N76_RS17640 (I8N76_17640) yccS 3518307..3520442 (+) 2136 WP_002898422.1 YccS family putative transporter -
  I8N76_RS17645 (I8N76_17645) sxy/tfoX 3520456..3521052 (-) 597 WP_004179217.1 TfoX/Sxy family DNA transformation protein Regulator
  I8N76_RS17650 (I8N76_17650) sulA 3521401..3521910 (+) 510 WP_004179215.1 SOS-induced cell division inhibitor SulA -
  I8N76_RS17655 (I8N76_17655) ompA 3522263..3523333 (+) 1071 WP_002898408.1 porin OmpA -
  I8N76_RS17660 (I8N76_17660) matP 3523465..3523917 (-) 453 WP_002898404.1 macrodomain Ter protein MatP -
  I8N76_RS17665 (I8N76_17665) - 3524103..3525860 (+) 1758 WP_004147851.1 Lon protease family protein -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22516.11 Da        Isoelectric Point: 10.0350

>NTDB_id=514832 I8N76_RS17645 WP_004179217.1 3520456..3521052(-) (sxy/tfoX) [Klebsiella pneumoniae strain KpC11]
MRKLVCPRLPQFQACVSPLGQLHTRPLFGGYSLAIDDTVFAMVAEGNIYLKACEQSAAYRVEHRNPLLTLRRHGRIVPLK
YYQIDDTLWRDEQQLFRLSLLSWQSAQREKNCRRASGRLKDLPNISFHMELQLIHAGIPDVRTLREVGAQEAWLRLRVNN
ASLSLSVLLALEGAIAGVHAAALPTPRRQELLEWAATR

Nucleotide


Download         Length: 597 bp        

>NTDB_id=514832 I8N76_RS17645 WP_004179217.1 3520456..3521052(-) (sxy/tfoX) [Klebsiella pneumoniae strain KpC11]
ATGAGAAAACTAGTTTGTCCGCGGCTCCCGCAATTTCAGGCCTGCGTCTCACCGCTGGGTCAACTGCATACTCGTCCGCT
CTTTGGCGGCTACAGCCTGGCTATTGATGATACGGTATTTGCGATGGTGGCCGAGGGGAACATTTATCTGAAGGCCTGCG
AGCAGAGCGCTGCTTATCGGGTGGAACATCGTAATCCTCTGTTAACGCTGCGCCGACACGGCCGCATAGTGCCGCTGAAG
TATTATCAAATTGACGACACTTTATGGCGCGATGAGCAGCAGCTTTTTCGGCTATCGCTACTGTCGTGGCAGAGTGCGCA
GCGCGAAAAGAACTGCCGACGGGCGTCGGGCCGCCTGAAGGATTTACCCAATATCAGCTTTCATATGGAATTGCAGCTGA
TTCACGCGGGCATACCGGACGTTAGGACGTTGCGGGAAGTTGGTGCGCAGGAGGCATGGCTGAGGCTACGCGTAAATAAT
GCTTCTTTATCGCTGAGCGTATTGCTGGCGCTGGAGGGGGCGATTGCCGGGGTACATGCCGCCGCGCTCCCGACGCCACG
GCGTCAGGAGCTTCTCGAATGGGCGGCTACCCGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(117-194)

TfoX N-terminal domain (TfoX_N)

(16-105)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A085DH59

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.269

99.495

0.51