Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   I7845_RS27070 Genome accession   NZ_CP065824
Coordinates   6059072..6059479 (-) Length   135 a.a.
NCBI ID   WP_016972942.1    Uniprot ID   A0A7Y8ER85
Organism   Pseudomonas tolaasii strain Pt11     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 6054072..6064479
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I7845_RS27055 (I7845_27050) - 6056075..6058126 (-) 2052 WP_017253946.1 methyl-accepting chemotaxis protein -
  I7845_RS27060 (I7845_27055) - 6058123..6058647 (-) 525 WP_016972940.1 chemotaxis protein CheW -
  I7845_RS27065 (I7845_27060) pilH 6058660..6059025 (-) 366 WP_016972941.1 twitching motility response regulator PilH -
  I7845_RS27070 (I7845_27065) pilG 6059072..6059479 (-) 408 WP_016972942.1 twitching motility response regulator PilG Regulator
  I7845_RS27075 (I7845_27070) gshB 6059719..6060672 (+) 954 WP_017253947.1 glutathione synthase -
  I7845_RS27080 (I7845_27075) - 6060750..6061655 (+) 906 WP_016972944.1 energy transducer TonB -
  I7845_RS27085 (I7845_27080) - 6061840..6062409 (+) 570 WP_016972945.1 YqgE/AlgH family protein -
  I7845_RS27090 (I7845_27085) ruvX 6062409..6062846 (+) 438 WP_016972946.1 Holliday junction resolvase RuvX -
  I7845_RS27095 (I7845_27090) pyrR 6062919..6063425 (+) 507 WP_016972947.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  I7845_RS27100 (I7845_27095) - 6063450..6064454 (+) 1005 WP_016972948.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14892.38 Da        Isoelectric Point: 7.3842

>NTDB_id=514787 I7845_RS27070 WP_016972942.1 6059072..6059479(-) (pilG) [Pseudomonas tolaasii strain Pt11]
MEQHSNALRVMVIDDSKTIRRTAETLLKNAGCDVITAIDGFDALARIVDHHPHIIFVDIMMPRLDGYQTCALVKNNPAFK
SIPVIMLSSKDGLFDKAKGRIVGVDQFLTKPFSKEELLGAIKAYVPAFAAVEQAH

Nucleotide


Download         Length: 408 bp        

>NTDB_id=514787 I7845_RS27070 WP_016972942.1 6059072..6059479(-) (pilG) [Pseudomonas tolaasii strain Pt11]
ATGGAACAGCATTCCAACGCCTTGAGAGTGATGGTGATCGACGATTCGAAAACGATCCGCCGCACCGCCGAAACCCTGTT
GAAGAACGCCGGCTGCGATGTCATCACGGCCATCGACGGTTTCGATGCGCTGGCCCGGATTGTCGATCACCACCCGCACA
TTATCTTTGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCGCTGGTGAAGAACAACCCGGCGTTCAAG
TCGATTCCGGTGATCATGTTGTCGTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTGGGTGTCGATCAGTT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTGGGCGCGATCAAGGCCTACGTGCCTGCCTTCGCCGCAGTAGAACAAG
CACACTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7Y8ER85

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

69.291

94.074

0.652
  vicR Streptococcus mutans UA159

38.889

93.333

0.363